RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TMEM246Q9BRR3 403 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 TTYH2Q9BSA4 534 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 NUSAP1Q9BXS6 441 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 TRMT13Q9NUP7 481 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 DCAF13Q9NV06 445 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 DKK3Q9UBP4 350 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PCDHGB6Q9Y5F9 930 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 LOC100506127A0A0U1RQW1 187 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CCRL2O00421 344 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 GABRDO14764 452 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ZW10O43264 779 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CREG1O75629 220 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 RHOBTB1O94844 696 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 MLYCDO95822 493 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PNPLA4P41247 253 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PGFP49763 221 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 HK3P52790 923 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 HUNKP57058 714 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 TTLL4Q14679 1199 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 NR6A1Q15406 480 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 C18orf21Q32NC0 220 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 FAM174BQ3ZCQ3 159 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ZC3H12BQ5HYM0 836 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 TUBA3EQ6PEY2 450 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 GPRIN3Q6ZVF9 776 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 SETD9Q8NE22 299 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 GTF2H4Q92759 462 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 AARSD1Q9BTE6 412 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ITPAQ9BY32 194 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 AMBNQ9NP70 447 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 UXTQ9UBK9 157 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ABCG2Q9UNQ0 655 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 RNF6Q9Y252 685 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 NYNRINQ9P2P1 1898 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 MYO1GB0I1T2 1018 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 M0R082 166 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 E2F3O00716 465 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 PCDHGA12O60330 932 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 RECQL5O94762 991 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CAPN1P07384 714 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CNPP09543 421 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 GMPSP49915 693 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF135P52742 658 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF280AP59817 542 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TUBA1BP68363 451 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CREMQ03060 361 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 GTF2H3Q13889 308 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 KIAA0040Q15053 153 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CDK10Q15131 360 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 AP5B1Q2VPB7 878 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ZFP69Q49AA0 526 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 BRMS1LQ5PSV4 323 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TIGD7Q6NT04 549 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ZCCHC8Q6NZY4 707 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 NOTUMQ6P988 496 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TUBA1AQ71U36 451 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 HIPK1Q86Z02 1210 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 SIX5Q8N196 739 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 AADATQ8N5Z0 425 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TOP6BLQ8N6T0 577 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 METTL6Q8TCB7 284 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CHAC2Q8WUX2 184 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 SLC13A3Q8WWT9 602 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 SLC38A4Q969I6 547 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 Q96MT0 163 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 NEDD4LQ96PU5 975 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 DEPDC7Q96QD5 511 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 DERL2Q9GZP9 239 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 AGO3Q9H9G7 860 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 HEBP1Q9NRV9 189 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 EHD3Q9NZN3 535 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 TSR3Q9UJK0 312 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 AGRPO00253 132 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 WBP4O75554 376 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ALX3O95076 343 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ATXN1LP0C7T5 689 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 HAPLN1P10915 354 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 POLR2EP19388 210 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 HOXA9P31269 272 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CYP2C18P33260 490 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 S100A5P33763 92 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CXCR4P61073 352 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 GALK2Q01415 458 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF45Q02386 682 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 CHRNEQ04844 493 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 MAD2L1BPQ15013 274 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 ABRAXAS2Q15018 415 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 GRIK4Q16099 956 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 FAM214AQ32MH5 1076 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 RFX4Q33E94 735 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 Q5BKY6 102 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 MRNIPQ6NTE8 343 aa10.11□□□□□ -0.79
CLIP4-208ENST00000456385 SHQ1Q6PI26 577 aaKnown RBP10.11□□□□□ -0.79
CLIP4-208ENST00000456385 LYPD8Q6UX82 237 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms