RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 WDR45BQ5MNZ6 344 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 ZCCHC23Q6ZST2 131 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 CEP68Q76N32 757 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PHACTR4Q8IZ21 702 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SKA2Q8WVK7 121 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PATE1Q8WXA2 126 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PIGKQ92643 395 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TMEM159Q96B96 161 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 MRPL57Q9BQC6 102 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 TIMM29Q9BSF4 260 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 C20orf27Q9GZN8 174 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 IQCGQ9H095 443 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 MRPL46Q9H2W6 279 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 OSGEPL1Q9H4B0 414 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SMOC1Q9H4F8 434 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 INTS9Q9NV88 658 aaKnown RBP10.73□□□□□ -0.69
SCN9A-205ENST00000454569 COPG2Q9UBF2 871 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 PDE10AQ9Y233 779 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 SNX11Q9Y5W9 270 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 DGKBQ9Y6T7 804 aa10.73□□□□□ -0.69
SCN9A-205ENST00000454569 OR52A4PA6NMU1 304 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 A8MT66 165 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 H3BM21 787 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 KPNA5O15131 536 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 GUCA1CO95843 209 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 TNFP01375 233 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 BPGMP07738 259 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CBSLP0DN79 551 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 FGF3P11487 239 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CPA3P15088 417 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 JUNDP17535 347 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 BGNP21810 368 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CBSP35520 551 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 MDH1P40925 334 aaKnown RBP10.72□□□□□ -0.69
SCN9A-205ENST00000454569 RGS4P49798 205 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 AGTR2P50052 363 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CLCNKAP51800 687 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 ATP6V0D1P61421 351 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 GNGT1P63211 74 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 PTK2BQ14289 1009 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 SHBQ15464 509 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 TTLL9Q3SXZ7 439 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 TUBB8Q3ZCM7 444 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 HHATQ5VTY9 493 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CAPRIN2Q6IMN6 1127 aaKnown RBP10.72□□□□□ -0.69
SCN9A-205ENST00000454569 SLC30A9Q6PML9 568 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 PRR23BQ6ZRT6 265 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 UBE2R2Q712K3 238 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-205ENST00000454569 IQCHQ86VS3 1027 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 PARGQ86W56 976 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 MYO1HQ8N1T3 1032 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 CCDC63Q8NA47 563 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 OR5AR1Q8NGP9 310 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 PHF21BQ96EK2 531 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 LRFN3Q9BTN0 628 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 LRRC61Q9BV99 259 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 TSSK1BQ9BXA7 367 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 UCKL1Q9NWZ5 548 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 DNAJC28Q9NX36 388 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 NKIRAS1Q9NYS0 192 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 RP1P56715 2156 aa10.72□□□□□ -0.69
SCN9A-205ENST00000454569 A6NCN8 305 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 TAPBPO15533 448 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 KERAO60938 352 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 SDC3O75056 442 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 PSIP1O75475 530 aaKnown RBP10.71□□□□□ -0.69
SCN9A-205ENST00000454569 SIX3O95343 332 aaPredicted RBP10.71□□□□□ -0.69
SCN9A-205ENST00000454569 CSF2P04141 144 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 ENO3P13929 434 aaPredicted RBP10.71□□□□□ -0.69
SCN9A-205ENST00000454569 ACTR1BP42025 376 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
SCN9A-205ENST00000454569 ACTR1AP61163 376 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 BNIP3Q12983 259 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 GRB7Q14451 532 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 TERF2Q15554 542 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 TGFBIQ15582 683 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 CCDC153Q494R4 210 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 ZYG11AQ6WRX3 759 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 CCDC91Q7Z6B0 441 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 GPSM1Q86YR5 675 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 CNPY4Q8N129 248 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 OR2I1PQ8NGU4 316 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 OR6Y1Q8NGX8 325 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 RHEBL1Q8TAI7 183 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 STAG3L4Q8TBR4 150 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 GPBAR1Q8TDU6 330 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 SLC12A9Q9BXP2 914 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 TRNAU1APQ9NX07 287 aaKnown RBP10.71□□□□□ -0.69
SCN9A-205ENST00000454569 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 RNF112Q9ULX5 631 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 PLAGL1Q9UM63 463 aa10.71□□□□□ -0.69
SCN9A-205ENST00000454569 A0A1B0GTW7 788 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 SUPT3HB4E1H0 165 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 EIF3FO00303 357 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PPP6CO00743 305 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 ITM2AO43736 263 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 SHOX2O60902 331 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 SUPT3HO75486 399 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms