RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NFKBIEO00221 500 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 CPNE6O95741 557 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 FDXRP22570 491 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 CD40LGP29965 261 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 GRK4P32298 578 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 GNPDA1P46926 289 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 TXNDC11Q6PKC3 985 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ZFAND4Q86XD8 727 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 GOLM1Q8NBJ4 401 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 BRSK1Q8TDC3 778 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ST3GAL5Q9UNP4 418 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PCDHB14Q9Y5E9 798 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ILVBLA1L0T0 632 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 OTCP00480 354 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PGRP06401 933 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 CBLBQ13191 982 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PON2Q15165 354 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 DESI1Q6ICB0 168 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 LETMD1Q6P1Q0 360 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 C16orf59Q7L2K0 433 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PANX1Q96RD7 426 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ATOH8Q96SQ7 321 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 NUSAP1Q9BXS6 441 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 FAM105AQ9NUU6 356 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 B3GNT3Q9Y2A9 372 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 SCELO95171 688 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 VIPP01282 170 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 MTHFD2P13995 350 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 GGT1P19440 569 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 SLC26A3P40879 764 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 MLLT6P55198 1093 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 CSTF3Q12996 717 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 TIGD6Q17RP2 521 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 PDE12Q6L8Q7 609 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 AFTPHQ6ULP2 937 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 KDELC1Q6UW63 502 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 DCP2Q8IU60 420 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 FUBP1Q96AE4 644 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 OSBPL10Q9BXB5 764 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 NMUR1Q9HB89 426 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 MRM3Q9HC36 420 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 CRLS1Q9UJA2 301 aa13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-210ENST00000453744 EFCAB10A6NFE3 127 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NOTOA8MTQ0 251 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 F5H5T6 163 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 CCRL2O00421 344 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 PTGESO14684 152 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 ADRA1AP35348 466 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 OR2B6P58173 313 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 CATSPEREQ5SY80 951 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF556Q9HAH1 456 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NTN4Q9HB63 628 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 ATP13A1Q9HD20 1204 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NMRK2Q9NPI5 230 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 IL37Q9NZH6 218 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 TBC1D14Q9P2M4 693 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 TEKT2Q9UIF3 430 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 TCRBV5S2A0A599 114 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 PPP5CP53041 499 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 HIST2H2ACQ16777 129 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 MARCH8Q5T0T0 291 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 DEPDC1Q5TB30 811 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NETO1Q8TDF5 533 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 TMLHEQ9NVH6 421 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 ANKMY1Q9P2S6 941 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 VPS9D1Q9Y2B5 631 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 TESMINQ9Y4I5 508 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 GRK3P35626 688 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 GPR15P49685 360 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 SEMG2Q02383 582 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 MXD1Q05195 221 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 FAM151BQ6UXP7 276 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 OR6Q1Q8NGQ2 317 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 SLC35B4Q969S0 331 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 MUL1Q969V5 352 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 DOK1Q99704 481 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 EBPLQ9BY08 206 aa13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 FARSBQ9NSD9 589 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-210ENST00000453744 NDST3O95803 873 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms