RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 AMIGO1Q86WK6 493 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 DNAJC1Q96KC8 554 aaKnown RBP11.28□□□□□ -0.6
SS18L1-203ENST00000450482 FERD3LQ96RJ6 166 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 SMAD5Q99717 465 aaKnown RBP11.28□□□□□ -0.6
SS18L1-203ENST00000450482 TBL1YQ9BQ87 522 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 DHRS4Q9BTZ2 278 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 OSBPL8Q9BZF1 889 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 CHRNA10Q9GZZ6 450 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 CUEDC1Q9NWM3 386 aaPredicted RBP11.28□□□□□ -0.6
SS18L1-203ENST00000450482 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
SS18L1-203ENST00000450482 SERTAD3Q9UJW9 196 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
SS18L1-203ENST00000450482 UTP20O75691 2785 aaKnown RBP11.28□□□□□ -0.6
SS18L1-203ENST00000450482 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 C2orf74A8MZ97 194 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 E7EQ34 232 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 KCNN4O15554 427 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 MAP3K7O43318 606 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 ZNF749O43361 778 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 SEMA7AO75326 666 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 STK10O94804 968 aaKnown RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 HBQ1P09105 142 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 RNF224P0DH78 156 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 RRADP55042 308 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 CCZ1BP86790 482 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 CCZ1P86791 482 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 ATP1A4Q13733 1029 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 KCTD11Q693B1 232 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 SPESP1Q6UW49 350 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 MICALCLQ6ZW33 695 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 MRGPREQ86SM8 312 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 SERPINA9Q86WD7 417 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 TMEM139Q8IV31 216 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 LRRC8AQ8IWT6 810 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 PIANPQ8IYJ0 282 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 CCDC170Q8IYT3 715 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 CLDN19Q8N6F1 224 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 PHC3Q8NDX5 983 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 SSC4DQ8WTU2 575 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 TFGQ92734 400 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 HGH1Q9BTY7 390 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 KLHL25Q9H0H3 589 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 XKR8Q9H6D3 395 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 GPR83Q9NYM4 423 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 ACTR10Q9NZ32 417 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 G3BP2Q9UN86 482 aaKnown RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 ICKQ9UPZ9 632 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
SS18L1-203ENST00000450482 ZNF106Q9H2Y7 1883 aaKnown RBP11.27□□□□□ -0.61
SS18L1-203ENST00000450482 SPTBN1Q01082 2364 aaKnown RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 C9J4A7 227 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 ZNF185O15231 689 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 ZNF189O75820 626 aaPredicted RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 AP2A2O94973 939 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 PRSS56P0CW18 603 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 AGXTP21549 392 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 PSMA3P25788 255 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 CTNNA2P26232 953 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 GABRA4P48169 554 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 PRKG2Q13237 762 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 SPARCL1Q14515 664 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 SPA17Q15506 151 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 ZIC1Q15915 447 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 DBN1Q16643 649 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 VWA5B1Q5TIE3 1220 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 DARS2Q6PI48 645 aaKnown RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 RAB43Q86YS6 212 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 C19orf47Q8N9M1 422 aaKnown RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 FLVCR1-AS1Q8TAF5 88 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 ALG3Q92685 438 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 TCTN2Q96GX1 697 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 IP6K3Q96PC2 410 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 GBP5Q96PP8 586 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 FAM118BQ9BPY3 351 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 C17orf62Q9BQA9 187 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 FAM60AQ9NP50 221 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 SLAMF7Q9NQ25 335 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 LUZP4Q9P127 313 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
SS18L1-203ENST00000450482 AP1M2Q9Y6Q5 423 aa11.26□□□□□ -0.61
SS18L1-203ENST00000450482 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 A6NL46 340 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 LIN7AO14910 233 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-203ENST00000450482 HCRTR1O43613 425 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 OR2B3O76000 313 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 TJP3O95049 919 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 TPBGLP0DKB5 382 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 UGT2B7P16662 529 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 ACADLP28330 430 aa11.25□□□□□ -0.61
SS18L1-203ENST00000450482 SHMT2P34897 504 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms