RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZNF7P17097 686 aaPredicted RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 ZNF8P17098 575 aaPredicted RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 KRT9P35527 623 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 HSPA9P38646 679 aaKnown RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 KPNA2P52292 529 aaKnown RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 STC1P52823 247 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 NKAIN1Q4KMZ8 207 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 RALGPS1Q5JS13 557 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 HENMT1Q5T8I9 393 aaKnown RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 ARMC12Q5T9G4 340 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 RESP18Q5W5W9 173 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 TRNP1Q6NT89 227 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 KIRREL2Q6UWL6 708 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 KRBA2Q6ZNG9 492 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 C16orf47Q6ZP98 133 aaPredicted RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 RFLNAQ6ZTI6 216 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 STRADAQ7RTN6 431 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 LRRTM4Q86VH4 590 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CDC20BQ86Y33 519 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 DOLPP1Q86YN1 238 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CCDC110Q8TBZ0 833 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 FKBP10Q96AY3 582 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 C18orf8Q96DM3 657 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 MEGF10Q96KG7 1140 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 TSG101Q99816 390 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 WDR54Q9H977 334 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 SP110Q9HB58 689 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 FAM207AQ9NSI2 230 aaPredicted RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 FANCLQ9NW38 375 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 ATXN10Q9UBB4 475 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 TMEM59LQ9UK28 342 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 POMT2Q9UKY4 750 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CDYLQ9Y232 598 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 DNAJC16Q9Y2G8 782 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 L3MBTL1Q9Y468 752 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 HS3ST3B1Q9Y662 390 aa7.59□□□□□ -1.19
LINC01961-201ENST00000449954 CHD3Q12873 2000 aaKnown RBP7.59□□□□□ -1.19
LINC01961-201ENST00000449954 FADS2P1A8MWK0 482 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 F8W735 103 aaPredicted RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 H7C1Q1 480 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 KLK8O60259 260 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 HPP00738 406 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CBSLP0DN79 551 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 ITGAXP20702 1163 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CDH3P22223 829 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 HTR7P34969 479 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CBSP35520 551 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 PEX19P40855 299 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 DRG2P55039 364 aaKnown RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 NKX6-1P78426 367 aaPredicted RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 PRKAA1Q13131 559 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 RABEP1Q15276 862 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CDO1Q16878 200 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 C1orf189Q5VU69 101 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 TMEM211Q6ICI0 200 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 HMBOX1Q6NT76 420 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CRTC3Q6UUV7 619 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 PAQR7Q86WK9 346 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 KBTBD2Q8IY47 623 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 GHDCQ8N2G8 530 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 TMEM35BQ8NCS4 154 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 MSANTD4Q8NCY6 345 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 GPR150Q8NGU9 434 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 NSMCE3Q96MG7 304 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 NUDCD1Q96RS6 583 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 SARGQ9BW04 601 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 OR2AG1Q9H205 316 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 UBE2TQ9NPD8 197 aaPredicted RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 TXLNGQ9NUQ3 528 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 BEX4Q9NWD9 120 aaPredicted RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 SLC23A2Q9UGH3 650 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 TRPS1Q9UHF7 1281 aa7.58□□□□□ -1.2
LINC01961-201ENST00000449954 NXT1Q9UKK6 140 aaKnown RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 LUC7L2Q9Y383 392 aaKnown RBP7.58□□□□□ -1.2
LINC01961-201ENST00000449954 CCDC88CQ9P219 2028 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 OR6C74A6NCV1 312 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 OR5H15A6NDH6 313 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 FAM227AF5H4B4 570 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 TPOP07202 933 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 UQCRHP07919 91 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 CTPS1P17812 591 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 SDC4P31431 198 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 CDH5P33151 784 aaPredicted RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PAPOLAP51003 745 aaKnown RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PMP22Q01453 160 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 ALDH6A1Q02252 535 aaKnown RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 IL10RBQ08334 325 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 TRAF2Q12933 501 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 SLC9A5Q14940 896 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PCBP2Q15366 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 RBBP7Q16576 425 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF569Q5MCW4 686 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 C3P1Q6ZMU1 363 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 SLFN11Q7Z7L1 901 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 AGGF1Q8N302 714 aaeCLIP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 CCDC185Q8N715 623 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 OR11G2Q8NGC1 345 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms