RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 CYP4F8P98187 520 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 RAB39AQ14964 217 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 CPSF6Q16630 551 aaKnown RBP eCLIP13.7□□□□□ -0.22
ITGB4-202ENST00000449880 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 OR10A6Q8NH74 314 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 SLC45A3Q96JT2 553 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 MGME1Q9BQP7 344 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 TM6SF2Q9BZW4 377 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 DNAJC11Q9NVH1 559 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 NKIRAS2Q9NYR9 191 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
ITGB4-202ENST00000449880 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
ITGB4-202ENST00000449880 FZD9O00144 591 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 FMO3P31513 532 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 CD97P48960 835 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SULT2A1Q06520 285 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ZC3H10Q96K80 434 aaKnown RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 TMEM209Q96SK2 561 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 MIR1-1HGQ9H1L0 117 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF536O15090 1300 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 DLGAP1O14490 977 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 OAS1P00973 400 aaKnown RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 MAGEA2P43356 314 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ARHGDIBP52566 201 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GPX6P59796 221 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ADAM15Q13444 863 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GTF2H2Q13888 395 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GTF2H2CQ6P1K8 395 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GPALPP1Q8IXQ4 340 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 MID1O15344 667 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 NOBOXO60393 691 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SNX4O95219 450 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 TOP3BO95985 862 aaKnown RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 KCTD19Q17RG1 926 aaPredicted RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GARNL3Q5VVW2 1013 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SNIP1Q8TAD8 396 aaKnown RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 FCRL4Q96PJ5 515 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 RASAL1O95294 804 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ADH1CP00326 375 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 HSD17B12Q53GQ0 312 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 PLCZ1Q86YW0 608 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 LRRC15Q8TF66 581 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 OR8D1Q8WZ84 308 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 LPPQ93052 612 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
ITGB4-202ENST00000449880 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 USP29Q9HBJ7 922 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 CPNE5Q9HCH3 593 aa13.69□□□□□ -0.22
ITGB4-202ENST00000449880 GLTPD2A6NH11 291 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 CACNB4O00305 520 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 RBM34P42696 430 aaKnown RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ATP6AP1Q15904 470 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 XKR5Q6UX68 686 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 DET1Q7L5Y6 550 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 BEND7Q8N7W2 519 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF431Q8TF32 576 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SLC38A4Q969I6 547 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 NECTIN3Q9NQS3 549 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF282Q9UDV7 671 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 AXIN1O15169 862 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 KRT33AO76009 404 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF806P0C7X5 589 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF697Q5TEC3 545 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 RPTNQ6XPR3 784 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MAPKAP1Q9BPZ7 522 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 CKLFQ9UBR5 152 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 RNF6Q9Y252 685 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MRPS33Q9Y291 106 aaKnown RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 PCDHGB3Q9Y5G1 929 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 TEX264Q9Y6I9 313 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 TSPAN1O60635 241 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 LRATO95237 230 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 APOC1P02654 83 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SCNN1AP37088 669 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MAB21L2Q9Y586 359 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MYBPC1Q00872 1141 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 CACNG1Q06432 222 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms