RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HMX3A6NHT5 357 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 A8MUA0 341 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ARSAP15289 507 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SOX11P35716 441 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ALDH3A2P51648 485 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SRP54P61011 504 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 STARD3Q14849 445 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TAF12Q16514 161 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 BCL7AQ4VC05 210 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TTC23Q5W5X9 447 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 GLB1L3Q8NCI6 653 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 OR9I1Q8NGQ6 314 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 RSPH9Q9H1X1 276 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 RNF186Q9NXI6 227 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 GRIP1Q9Y3R0 1128 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 V9GYQ6 96 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SERPINI2O75830 405 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 LBPP18428 481 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 CTU2Q2VPK5 515 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF470Q6ECI4 717 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 EID3Q8N140 333 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 YIPF6Q96EC8 236 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 TIMM13Q9Y5L4 95 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 YJEFN3A6XGL0 299 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 SUPT7LO94864 414 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 SLC35E2BP0CK96 405 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PARP15Q460N3 678 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 IFNEQ86WN2 208 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 TRIM54Q9BYV2 358 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PLXNA3P51805 1871 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 SLC1A7O00341 560 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 MED26O95402 600 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 GOT2P00505 430 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 NMBRP28336 390 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 THPOP40225 353 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 ETV1P50549 477 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 BNC1Q01954 994 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 CD47Q08722 323 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 GPR50Q13585 617 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PM20D1Q6GTS8 502 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 NRARPQ7Z6K4 114 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 CDH24Q86UP0 819 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 STK32CQ86UX6 486 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 DEDD2Q8WXF8 326 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 APOL2Q9BQE5 337 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
SYNGAP1-204ENST00000449372 CASTOR2A6NHX0 329 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 H3BMM5 538 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 CAPN5O15484 640 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 HSD17B1P14061 328 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 TPH1P17752 444 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 IL1RL1Q01638 556 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 DAG1Q14118 895 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ACOX1Q15067 660 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 KCTD11Q693B1 232 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 SPATA19Q7Z5L4 167 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 PRRG3Q9BZD7 231 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ERVMER34-1Q9H9K5 563 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 NTN4Q9HB63 628 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMEM45AQ9NWC5 275 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 EFCAB9A8MZ26 197 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 NR5A2O00482 541 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 F7P08709 466 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 PCSK1P29120 753 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ABCG1P45844 678 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 MAP2K4P45985 399 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 MICU2Q8IYU8 434 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF555Q8NEP9 628 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 UBXN10Q96LJ8 280 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 GLOD4Q9HC38 313 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 MAGED1Q9Y5V3 778 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-204ENST00000449372 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 LRIG2O94898 1065 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 TALDO1P37837 337 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms