RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SLC32A1Q9H598 525 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 FBRSQ9HAH7 460 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 CLDND1Q9NY35 253 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 TRPS1Q9UHF7 1281 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 POLG2Q9UHN1 485 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 BCAP29Q9UHQ4 241 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 ITM2BQ9Y287 266 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 LRRK1Q38SD2 2015 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 A0A088AWK7 358 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 OR2AG2A6NM03 316 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ARNTLO00327 626 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 OR7A17O14581 309 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TAPBPO15533 448 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SPINT1O43278 529 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 VEGFDO43915 354 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SYNCRIPO60506 623 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 MTX2O75431 263 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 MATN4O95460 622 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 CATP04040 527 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 LINC00032P0C843 101 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 PRR35P0CG20 571 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 PCSK2P16519 638 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 GM2AP17900 193 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 C5AR1P21730 350 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 P2RY2P41231 377 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 CAMK2GQ13555 558 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SMU1Q2TAY7 513 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 FBXO48Q5FWF7 155 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 C1orf146Q5VVC0 180 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 RAET1GQ6H3X3 334 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SDE2Q6IQ49 451 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 EP400NLQ6ZTU2 488 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ENDOVQ8N8Q3 282 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 CDYL2Q8N8U2 506 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 RASGEF1AQ8N9B8 481 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 PCYOX1LQ8NBM8 494 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 OR4F6Q8NGB9 312 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TSPEARQ8WU66 669 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 NAT14Q8WUY8 206 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ATL1Q8WXF7 558 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 JADE3Q92613 823 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ESAMQ96AP7 390 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 RCN3Q96D15 328 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 MARK4Q96L34 752 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 KCNA7Q96RP8 456 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 P2RY13Q9BPV8 354 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TMEM79Q9BSE2 394 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC29A3Q9BZD2 475 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 RSPH9Q9H1X1 276 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TUBB1Q9H4B7 451 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF576Q9H609 170 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TRIM39Q9HCM9 518 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 CACNA2D2Q9NY47 1150 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC7A8Q9UHI5 535 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF225Q9UK10 706 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 PDE10AQ9Y233 779 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 BTRCQ9Y297 605 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 TIMM22Q9Y584 194 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 FADS3Q9Y5Q0 445 aa10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 PRRC2BQ5JSZ5 2229 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC28A1O00337 649 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 SGTAO43765 313 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 MMP20O60882 483 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 PEX11AO75192 247 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 TBX10O75333 385 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 FKBP6O75344 327 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CAPN1P07384 714 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 ERVPABLB-1P60509 514 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 ERVK-8P63133 956 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CNTN1Q12860 1018 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 TRAF3Q13114 568 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 MAD2L1Q13257 205 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 KPNB1Q14974 876 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CST6Q15828 149 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 ATP6AP1LQ52LC2 224 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 PGM2L1Q6PCE3 622 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 TMEM220Q6QAJ8 160 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 HACD2Q6Y1H2 254 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 BNC2Q6ZN30 1099 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 DSELQ8IZU8 1212 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 FBXW8Q8N3Y1 598 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 ST13P5Q8NFI4 369 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 OR52B6Q8NGF0 335 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 DLG3Q92796 817 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CHFRQ96EP1 664 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 PPP3R2Q96LZ3 170 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 NOP53Q9NZM5 478 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CCDC167Q9P0B6 97 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 GPR34Q9UPC5 381 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 ASB1Q9Y576 335 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CKAP5Q14008 2032 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 CHD7Q9P2D1 2997 aa10.33□□□□□ -0.76
VIPAS39-203ENST00000448935 C17orf113A0A1B0GUU1 675 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms