RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MINPP1Q9UNW1 487 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PCDHB5Q9Y5E4 795 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 U3KQV3 271 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PTPRKQ15262 1439 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PRORSD1PA6NEY8 169 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 IL7RP16871 459 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 MGAT1P26572 445 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 FADDQ13158 208 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 IFNL1Q8IU54 200 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RNF32Q9H0A6 362 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 THAP2Q9H0W7 228 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 QPCTLQ9NXS2 382 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ACTR3BQ9P1U1 418 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SH3BGRLO75368 114 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 H6PDO95479 791 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CAMLGP49069 296 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RAB10P61026 200 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 JAGN1Q8N5M9 183 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ELP5Q8TE02 316 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TIFAQ96CG3 184 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TFB2MQ9H5Q4 396 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 MALT1Q9UDY8 824 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SIX4Q9UIU6 781 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TNRQ92752 1358 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TRAPPC13A5PLN9 417 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 C8BP07358 591 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 DPEP1P16444 411 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 UGT1A3P35503 534 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 NFKB2Q00653 900 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 DDR1Q08345 913 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SNTA1Q13424 505 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PDK4Q16654 411 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CTXN3Q4LDR2 81 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SPOCD1Q6ZMY3 1216 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 PHYKPLQ8IUZ5 450 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SLC43A2Q8N370 569 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ZNF439Q8NDP4 499 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 NPLQ9BXD5 320 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 YTHDF1Q9BYJ9 559 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 KDM6AO15550 1401 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 UGGT2Q9NYU1 1516 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RFX7Q2KHR2 1363 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RBM47A0AV96 593 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 SEC14L6B5MCN3 397 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ZNF254O75437 659 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 SCGB1D1O95968 90 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 NDUFB10O96000 172 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 CYP1A2P05177 515 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 OR12D2P58182 307 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 RAB41Q5JT25 222 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 MSI2Q96DH6 328 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 HS6ST2Q96MM7 605 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 NIFKQ9BYG3 293 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 PUS3Q9BZE2 481 aaKnown RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.81□□□□□ -1
NIPBL-202ENST00000448238 PRMT8Q9NR22 394 aaPredicted RBP8.81□□□□□ -1
NIPBL-202ENST00000448238 ALKBH4Q9NXW9 302 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 TAS2R8Q9NYW2 309 aa8.81□□□□□ -1
NIPBL-202ENST00000448238 ARGFXA6NJG6 315 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 F8W036 122 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PROSCO94903 275 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ERCC1P07992 297 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 PKMP14618 531 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 ADORA1P30542 326 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TAS2R31P59538 309 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 BLOC1S1P78537 153 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CAMK2DQ13557 499 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 RUNX2Q13950 521 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TLR10Q9BXR5 811 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PCDHAC1Q9H158 963 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TCEAL2Q9H3H9 227 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 KCNJ16Q9NPI9 418 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 DUSP22Q9NRW4 184 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 KBTBD4Q9NVX7 518 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 F5H6K3 240 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MT-ND2P03891 347 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 GYPCP04921 128 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TUBP50607 506 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SLC5A3P53794 718 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 KLRC3Q07444 240 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 DOK6Q6PKX4 331 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CMIPQ8IY22 773 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 NXPE1Q8N323 547 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MARVELD2Q8N4S9 558 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CPSF7Q8N684 471 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 TM9SF4Q92544 642 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 FGGYQ96C11 551 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TGM7Q96PF1 710 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ZNF559Q9BR84 538 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 OR51V1Q9H2C8 321 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 HIF1ANQ9NWT6 349 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 AZIN1O14977 448 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 NKRFO15226 690 aaKnown RBP eCLIP8.8□□□□□ -13e-8■■■■■ 27.5
NIPBL-202ENST00000448238 OR8U9P0C7N5 309 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 RPL35P42766 123 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 DSG2Q14126 1118 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SLC22A25Q6T423 547 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 VASH1Q7L8A9 365 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 BEST4Q8NFU0 473 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms