RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 OR4K2Q8NGD2 314 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 STYXQ8WUJ0 223 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 AURKBQ96GD4 344 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ERVK-11Q9UQG0 969 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ARPC4-TTLL3A0A0A6YYG9 625 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 PRH1P02810 166 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ANXA4P09525 319 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 IGFBP4P22692 258 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ITPKAP23677 461 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 VARSP26640 1264 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 RPL6Q02878 288 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 TCEA2Q15560 299 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF248Q8NDW4 579 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 DNAJA4Q8WW22 397 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 TRUB1Q8WWH5 349 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 TM6SF2Q9BZW4 377 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MIOSQ9NXC5 875 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 PCDHGB3Q9Y5G1 929 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 PDCD5O14737 125 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 CILPO75339 1184 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ERN1O75460 977 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 EIF2S3P41091 472 aaKnown RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MAGEA12P43365 314 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 ADAM8P78325 824 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 DNAJB7Q7Z6W7 309 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-203ENST00000445220 COLGALT2Q8IYK4 626 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 PM20D2Q8IYS1 436 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 EXOC2Q96KP1 924 aa18.32■□□□□ 0.52
SHANK3-203ENST00000445220 FAM189A1O60320 539 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ITGB1P05556 798 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 NPR2P20594 1047 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 MYLK3Q32MK0 819 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 USP41Q3LFD5 358 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 DCAF12L1Q5VU92 463 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 OR10G2Q8NGC3 310 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SLC35B2Q8TB61 432 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 CCDC107Q8WV48 283 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 TMEM246Q9BRR3 403 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ZSCAN5AQ9BUG6 496 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 FAIMQ9NVQ4 179 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 RNF6Q9Y252 685 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 IGKV6D-41A0A0C4DH26 115 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 RPS3P23396 243 aaKnown RBP eCLIP18.31■□□□□ 0.521e-7■■■■□ 20.3
SHANK3-203ENST00000445220 TUSC3Q13454 348 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 PRAMEF19Q5SWL8 479 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 INO80EQ8NBZ0 244 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 TSEN15Q8WW01 171 aaKnown RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF354BQ96LW1 612 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SIX2Q9NPC8 291 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ARHGEF4Q9NR80 690 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 MON2Q7Z3U7 1717 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 K7EPI3 171 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SCAMP3O14828 347 aaKnown RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 HCN1O60741 890 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ARL2P36404 184 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 PTPN9P43378 593 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 HSPA7P48741 367 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SRSF11Q05519 484 aaKnown RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 C1orf189Q5VU69 101 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ESRP1Q6NXG1 681 aaKnown RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 FRRS1Q6ZNA5 592 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SPERTQ8NA61 448 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 FBXL20Q96IG2 436 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF285Q96NJ3 590 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 C1orf109Q9NX04 203 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 XPNPEP2O43895 674 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SLC25A12O75746 678 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 SLC25A14O95258 325 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 CYP3A5P20815 502 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 FAM110CQ1W6H9 321 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 CAPN13Q6MZZ7 669 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-203ENST00000445220 EPGNQ6UW88 154 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 PLCZ1Q86YW0 608 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 PHTF2Q8N3S3 785 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ADAMTS15Q8TE58 950 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 NECTIN3Q9NQS3 549 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 FKBP7Q9Y680 259 aa18.31■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF536O15090 1300 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 TCAF2A6NFQ2 919 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 SLITRK5O94991 958 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RPS14P62263 151 aaKnown RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 ADAM15Q13444 863 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 CAMK1Q14012 370 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 CERS6Q6ZMG9 384 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 EMID1Q96A84 441 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RFT1Q96AA3 541 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 AP2M1Q96CW1 435 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RNF31Q96EP0 1072 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 NFAT5O94916 1531 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 IGLV3-22A0A075B6J6 115 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 DNAJB5O75953 348 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 SERPINA3P01011 423 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 CTPS1P17812 591 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 HTR7P34969 479 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RGS8P57771 180 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 C2orf80Q0P641 193 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF460Q14592 562 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms