RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SHMT2P34897 504 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 CLCN7P51798 805 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 IL2P60568 153 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 POU4F1Q01851 419 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 PRKG2Q13237 762 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 SQSTM1Q13501 440 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 TRA2AQ13595 282 aaKnown RBP eCLIP13.73□□□□□ -0.21
SSBP3-208ENST00000444533 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
SSBP3-208ENST00000444533 TMEM71Q6P5X7 295 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF549Q6P9A3 640 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 DCBLD1Q8N8Z6 715 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 OR4D9Q8NGE8 314 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 RAD51AP1Q96B01 352 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 RDH14Q9HBH5 336 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 LNPEPQ9UIQ6 1025 aa13.73□□□□□ -0.21
SSBP3-208ENST00000444533 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
SSBP3-208ENST00000444533 ATXN7L1Q9ULK2 861 aaPredicted RBP13.73□□□□□ -0.21
SSBP3-208ENST00000444533 A0A1W2PQM1 296 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ZNF839A8K0R7 811 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ZBTB14O43829 449 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 RASSF9O75901 435 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 F7P08709 466 aaPredicted RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 MPC1LP0DKB6 136 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 STMN1P16949 149 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 GABRB3P28472 473 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ECHS1P30084 290 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ABCG1P45844 678 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 CAPZBP47756 277 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 EIF3IQ13347 325 aaKnown RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ISXQ2M1V0 245 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ACSBG2Q5FVE4 666 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 RBM20Q5T481 1227 aaKnown RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 LGSNQ5TDP6 509 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 AMIGO1Q86WK6 493 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 VRK3Q8IV63 474 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 NKAPQ8N5F7 415 aaKnown RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 OR4E2Q8NGC2 313 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 CD200R1Q8TD46 325 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 RBBP8Q99708 897 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 SCNM1Q9BWG6 230 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 TRIM54Q9BYV2 358 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 TFB2MQ9H5Q4 396 aaKnown RBP13.72□□□□□ -0.21
SSBP3-208ENST00000444533 ACSS3Q9H6R3 686 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 HRASLS2Q9NWW9 162 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 CDYLQ9Y232 598 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 PSAT1Q9Y617 370 aa13.72□□□□□ -0.21
SSBP3-208ENST00000444533 EXOC1LA0A1B0GW35 172 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 GSAPA4D1B5 854 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 OR6C74A6NCV1 312 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CXorf49A8MYA2 514 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-208ENST00000444533 C8GP07360 202 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 HIST1H2AGP0C0S8 130 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-208ENST00000444533 HIST1H2ADP20671 130 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CYP2A7P20853 494 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 FDXRP22570 491 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CCKBRP32239 447 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CSTF2P33240 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSBP3-208ENST00000444533 MSH2P43246 934 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 ARL4DP49703 201 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 SERPINB9P50453 376 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 LIMK2P53671 638 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CDKN2DP55273 166 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 SNAP47Q5SQN1 464 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 RAPH1Q70E73 1250 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CPNE9Q8IYJ1 553 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 MCOLN3Q8TDD5 553 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 UBLCP1Q8WVY7 318 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-208ENST00000444533 SLC22A18Q96BI1 424 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 MRRFQ96E11 262 aaKnown RBP13.71□□□□□ -0.21
SSBP3-208ENST00000444533 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 HIST1H2AHQ96KK5 128 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 TGM7Q96PF1 710 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 CD180Q99467 661 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 HIST1H2AJQ99878 128 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 H2AFJQ9BTM1 129 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 POPDC3Q9HBV1 291 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 GPAMQ9HCL2 828 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 OR6C2Q9NZP2 312 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 ENTPD2Q9Y5L3 495 aa13.71□□□□□ -0.21
SSBP3-208ENST00000444533 PRAMEF33A0A0G2JMD5 474 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 OR5K3A6NET4 321 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 HGSO14964 777 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 TOX3O15405 576 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 CAPN5O15484 640 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 PIAS1O75925 651 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 KRT38O76015 456 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 MATN4O95460 622 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms