RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PKP3Q9Y446 797 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 N6AMT1Q9Y5N5 214 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 PABPN1LA6NDY0 278 aaKnown RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 RGS10O43665 173 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 FMO4P31512 558 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 TGFBR2P37173 567 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 CPT1AP50416 773 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 SCNN1GP51170 649 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 RAB41Q5JT25 222 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 PPP2R2DQ66LE6 453 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 TIGD7Q6NT04 549 aaPredicted RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 GDPD3Q7L5L3 318 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 PRSS48Q7RTY5 328 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 GALNT7Q86SF2 657 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 IMP4Q96G21 291 aaKnown RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 DDX28Q9NUL7 540 aaKnown RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 UXTQ9UBK9 157 aaPredicted RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 PCTPQ9UKL6 214 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 ARVCFO00192 962 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 BTN3A1O00481 513 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 FAM20BO75063 409 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 EPHA2P29317 976 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 CLK3P49761 638 aaKnown RBP19.92■□□□□ 0.78
SHOX2-203ENST00000441443 PON2Q15165 354 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 LRRC8DQ7L1W4 858 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 FBLIM1Q8WUP2 373 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 CATSPERBQ9H7T0 1116 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 ATP13A1Q9HD20 1204 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 ST3GAL5Q9UNP4 418 aa19.92■□□□□ 0.78
SHOX2-203ENST00000441443 ELOVL7A1L3X0 281 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 TAF4O00268 1085 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 MRPL19P49406 292 aaKnown RBP19.91■□□□□ 0.78
SHOX2-203ENST00000441443 CRYBB1P53674 252 aaPredicted RBP19.91■□□□□ 0.78
SHOX2-203ENST00000441443 GTDC1Q4AE62 458 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 IL27RAQ6UWB1 636 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 AHSA2Q719I0 299 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 C14orf80Q86SX3 495 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 NLGN4XQ8N0W4 816 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 FUBP1Q96AE4 644 aaKnown RBP19.91■□□□□ 0.78
SHOX2-203ENST00000441443 NUSAP1Q9BXS6 441 aaKnown RBP19.91■□□□□ 0.78
SHOX2-203ENST00000441443 REXO4Q9GZR2 422 aaKnown RBP19.91■□□□□ 0.78
SHOX2-203ENST00000441443 MIOSQ9NXC5 875 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 QPCTLQ9NXS2 382 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 BOLA1Q9Y3E2 137 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 SPO11Q9Y5K1 396 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 HTTP42858 3142 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 HHLA1C9JL84 531 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 GABRDO14764 452 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 POMCP01189 267 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 KCNE1P15382 129 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 CYP4F3Q08477 520 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 NR6A1Q15406 480 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 GCNT7Q6ZNI0 430 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 GPRIN3Q6ZVF9 776 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 C3orf58Q8NDZ4 430 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 RRAGCQ9HB90 399 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 UGT2A1Q9Y4X1 527 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 ZSWIM8A7E2V4 1837 aa19.91■□□□□ 0.78
SHOX2-203ENST00000441443 A0A1W2PQ67 120 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 M0QZ92 97 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 MMP2P08253 660 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 LIPAP38571 399 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 RFTN2Q52LD8 501 aaPredicted RBP19.9■□□□□ 0.78
SHOX2-203ENST00000441443 FAM209AQ5JX71 171 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 PARP16Q8N5Y8 322 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 CCDC115Q96NT0 180 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 PPP1R2P1Q96PQ5 205 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 AARSD1Q9BTE6 412 aaKnown RBP19.9■□□□□ 0.78
SHOX2-203ENST00000441443 SLC45A1Q9Y2W3 748 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 GMPPBQ9Y5P6 360 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 NYNRINQ9P2P1 1898 aaKnown RBP19.9■□□□□ 0.78
SHOX2-203ENST00000441443 METTL15A6NJ78 407 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 A8MV72 311 aaPredicted RBP19.9■□□□□ 0.78
SHOX2-203ENST00000441443 SERPINA1P01009 418 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 PTGR1Q14914 329 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 TPRG1LQ5T0D9 272 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 MMP27Q9H306 513 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 RNF167Q9H6Y7 350 aa19.9■□□□□ 0.78
SHOX2-203ENST00000441443 TSR3Q9UJK0 312 aaKnown RBP19.9■□□□□ 0.78
SHOX2-203ENST00000441443 SAGE2PA6NJ88 616 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 TNFRSF10AO00220 468 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 AIREO43918 545 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 PTTG1O95997 202 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 JUNDP17535 347 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 ERVPABLB-1P60509 514 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 IL18R1Q13478 541 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 GTF2H3Q13889 308 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 SETMARQ53H47 684 aaPredicted RBP19.89■□□□□ 0.78
SHOX2-203ENST00000441443 SOWAHCQ53LP3 525 aaPredicted RBP19.89■□□□□ 0.78
SHOX2-203ENST00000441443 MRNIPQ6NTE8 343 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 LETMD1Q6P1Q0 360 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 SETD9Q8NE22 299 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 OR8J3Q8NGG0 315 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 NETO1Q8TDF5 533 aa19.89■□□□□ 0.78
SHOX2-203ENST00000441443 AGO3Q9H9G7 860 aaKnown RBP19.89■□□□□ 0.78
SHOX2-203ENST00000441443 AGO1Q9UL18 857 aaKnown RBP19.89■□□□□ 0.78
SHOX2-203ENST00000441443 ARNTLO00327 626 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 DNTTP04053 509 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 SUOXP51687 545 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 ZNF157P51786 506 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms