RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 K7ESM1 405 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CCL22O00626 93 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SDHDO14521 159 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ARHGAP33O14559 1287 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 STX16O14662 325 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KDELR3O43731 214 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 HYAL3O43820 417 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ZBTB14O43829 449 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DNAJA2O60884 412 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SMIM24O75264 130 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 MTX2O75431 263 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PRNPP04156 253 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 LINGO3P0C6S8 592 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 NCF2P19878 526 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 GABRB3P28472 473 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CD38P28907 300 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CNR2P34972 360 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ETV3P41162 512 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SLC1A2P43004 574 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 WNT3AP56704 352 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DYNC1I2Q13409 638 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 FGL2Q14314 439 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DEFB133Q30KQ1 61 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SLC9B1Q4ZJI4 515 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PRRT3Q5FWE3 981 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 TPRG1LQ5T0D9 272 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF648Q5T619 568 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PIP5KL1Q5T9C9 394 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 TTC23LQ6PF05 361 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 BORAQ6PGQ7 559 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 IZUMO2Q6UXV1 221 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SLC36A4Q6YBV0 504 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 Q6ZSR6 202 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 RAB44Q7Z6P3 723 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 HID1Q8IV36 788 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DSELQ8IZU8 1212 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PGBD5Q8N414 524 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ICA1LQ8NDH6 482 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KCNV2Q8TDN2 545 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SCAMP4Q969E2 229 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SPDL1Q96EA4 605 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 LENG8Q96PV6 779 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 HOPXQ9BPY8 73 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 TRIM56Q9BRZ2 755 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 EFHD1Q9BUP0 239 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 MRPL1Q9BYD6 325 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 POLR1EQ9GZS1 481 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PCDH12Q9NPG4 1184 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 XPR1Q9UBH6 696 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 MARCOQ9UEW3 520 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SLC6A14Q9UN76 642 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ZFR2Q9UPR6 939 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SPTBP11277 2137 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PRSS51A0A1B0GVH4 220 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CPED1A4D0V7 1026 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PROB1E7EW31 1015 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 H3BNX3 289 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KLK8O60259 260 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PRAMEF11O60813 436 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 VAPBO95292 243 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 STAMBPO95630 424 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 POP4O95707 220 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CRTAMO95727 393 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ADH1BP00325 375 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 LYNP07948 512 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CELA2BP08218 269 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ELFN1P0C7U0 828 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PABPC4LP0CB38 370 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 THOP1P52888 689 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 HERVK_113P63132 956 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 BNIP2Q12982 314 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 INPP5AQ14642 412 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PTPRCAPQ14761 206 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KIF26BQ2KJY2 2108 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SAMD4BQ5PRF9 694 aaKnown RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KIAA0895LQ68EN5 471 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 OGFOD2Q6N063 350 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DHRS13Q6UX07 377 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SPATA19Q7Z5L4 167 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KIAA0907Q7Z7F0 614 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF761Q86XN6 746 aaPredicted RBP4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PCYOX1LQ8NBM8 494 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PLA2G15Q8NCC3 412 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 IPMKQ8NFU5 416 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 OR2T34Q8NGX1 318 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 BRSK1Q8TDC3 778 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 CXorf40AQ8TE69 158 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 NELL1Q92832 810 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 DTNBP1Q96EV8 351 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PPP1R16AQ96I34 528 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ELMO2Q96JJ3 720 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 MGME1Q9BQP7 344 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 ERVK-6Q9BXR3 956 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 SLC17A9Q9BYT1 436 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 KCNH6Q9H252 994 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 PDFQ9HBH1 243 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 GULP1Q9UBP9 304 aa4.67□□□□□ -1.66
EDEM3-203ENST00000439962 AP3M1Q9Y2T2 418 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms