RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PILRAQ9UKJ1 303 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 POMT2Q9UKY4 750 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 TMEM184BQ9Y519 407 aaPredicted RBP24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 MAD1L1Q9Y6D9 718 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 GSAPA4D1B5 854 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 GPC4O75487 556 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 STK17BO94768 372 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 ZBTB11O95625 1053 aaPredicted RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 RPN2P04844 631 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 AOAHP28039 575 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 SHMT2P34897 504 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 KPNA2P52292 529 aaKnown RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 CSE1LP55060 971 aaKnown RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 ADARP55265 1226 aaKnown RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 EIF3BP55884 814 aaKnown RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 HSD11B2P80365 405 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 ACY1Q03154 408 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 BPHLQ86WA6 291 aaPredicted RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 PPP1R3BQ86XI6 285 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 KLHL7Q8IXQ5 586 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 CACNA2D3Q8IZS8 1091 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 NLGN4XQ8N0W4 816 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 ZSCAN1Q8NBB4 408 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 NLGN4YQ8NFZ3 816 aaPredicted RBP24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 LKAAEAR1Q8TD35 194 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 C1GALT1Q9NS00 363 aa24.02■■□□□ 1.44
RAPGEF1-206ENST00000438647 USP1O94782 785 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 ESR1P03372 595 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 FGF5P12034 268 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 CDH3P22223 829 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 MAP4P27816 1152 aaKnown RBP24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 PTGIRP43119 386 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 DR1Q01658 176 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 RHDQ02161 417 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 TUBB3Q13509 450 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 THOC5Q13769 683 aaKnown RBP24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 TMTC4Q5T4D3 741 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 OTOAQ7RTW8 1153 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 VASH2Q86V25 355 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 CILP2Q8IUL8 1156 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 RASGRP3Q8IV61 690 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 KRT222Q8N1A0 295 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 LPGAT1Q92604 370 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 ULBP3Q9BZM4 244 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 SPRY4Q9C004 299 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 INTS10Q9NVR2 710 aaKnown RBP24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 CDYLQ9Y232 598 aa24.01■■□□□ 1.43
RAPGEF1-206ENST00000438647 C2orf74A8MZ97 194 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 BTN3A1O00481 513 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 MAP3K7O43318 606 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 SLCO2B1O94956 709 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 MAP7Q14244 749 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 LARP7Q4G0J3 582 aaKnown RBP eCLIP24■■□□□ 1.43
RAPGEF1-206ENST00000438647 UNC5DQ6UXZ4 953 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 LMNTD2Q8IXW0 634 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 D2HGDHQ8N465 521 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 STAMBPL1Q96FJ0 436 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 SIGLEC10Q96LC7 697 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 SOHLH2Q9NX45 425 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 OR6C2Q9NZP2 312 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 RARRES3Q9UL19 164 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 TDRKHQ9Y2W6 561 aaKnown RBP24■■□□□ 1.43
RAPGEF1-206ENST00000438647 MGAQ8IWI9 3026 aa24■■□□□ 1.43
RAPGEF1-206ENST00000438647 ZCWPW2A0A1B0GU75 182 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 SMAPO00193 183 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 BTN3A3O00478 584 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 EFSO43281 561 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 PRDX3P30048 256 aaKnown RBP23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 FMO4P31512 558 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 LONRF1Q17RB8 773 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 PLEKHS1Q5SXH7 462 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 IZUMO3Q5VZ72 239 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 ZNF470Q6ECI4 717 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 ESX1Q8N693 406 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 CALML6Q8TD86 181 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 BIRC8Q96P09 236 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 FCRL4Q96PJ5 515 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 TRIM56Q9BRZ2 755 aaKnown RBP23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 XKR8Q9H6D3 395 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 ICKQ9UPZ9 632 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 BTRCQ9Y297 605 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 MRFAP1Q9Y605 127 aa23.99■■□□□ 1.43
RAPGEF1-206ENST00000438647 ERVH48-1M5A8F1 160 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 DLGAP3O95886 979 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 FOLR1P15328 257 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 MORF4L2Q15014 288 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 CTSL3PQ5NE16 218 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 VRK3Q8IV63 474 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 DCUN1D3Q8IWE4 304 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 ADGRF3Q8IZF5 1079 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 KIAA1143Q96AT1 154 aaPredicted RBP23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 NAT9Q9BTE0 207 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 EFHD1Q9BUP0 239 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 FGF21Q9NSA1 209 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 ACTR10Q9NZ32 417 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 CRYL1Q9Y2S2 319 aa23.98■■□□□ 1.43
RAPGEF1-206ENST00000438647 PIPSLA2A3N6 862 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 CACNA1GO43497 2377 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SPAG6O75602 509 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms