RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TMEM173Q86WV6 379 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM72BQ86X60 149 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TSPAN14Q8NG11 270 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 OR10S1Q8NGN2 331 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 MOSPD2Q8NHP6 518 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 LRRC8CQ8TDW0 803 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 DAZLQ92904 295 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 NXNL1Q96CM4 212 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ALG14Q96F25 216 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 STAMBPL1Q96FJ0 436 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF354BQ96LW1 612 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 MS4A10Q96PG2 267 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 C16orf70Q9BSU1 422 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 NAA11Q9BSU3 229 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM129AQ9BZQ8 928 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ST6GALNAC4Q9H4F1 302 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CNOT10Q9H9A5 744 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SDF2L1Q9HCN8 221 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 MBNL1Q9NR56 388 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 OLAHQ9NV23 265 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 NPAP1Q9NZP6 1156 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 DDX25Q9UHL0 483 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 OSGIN1Q9UJX0 560 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 JRKLQ9Y4A0 524 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 NME7Q9Y5B8 376 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SPIN1Q9Y657 262 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC22A3O75751 556 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 C22orf31O95567 290 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCDC175P0C221 793 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 FGF5P12034 268 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 FDPSP14324 419 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 ERCC2P18074 760 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 ROR1Q01973 937 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 KRT39Q6A163 491 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC27A1Q6PCB7 646 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 FIGLAQ6QHK4 219 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 IL27RAQ6UWB1 636 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 LINGO4Q6UY18 593 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCDC186Q7Z3E2 898 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 GALNTL5Q7Z4T8 443 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 DNAJB7Q7Z6W7 309 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF595Q8IYB9 648 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC4A11Q8NBS3 891 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 KLHDC9Q8NEP7 349 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 EXD1Q8NHP7 514 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 HDAC11Q96DB2 347 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 FER1L6-AS2Q96M78 137 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 OLFM1Q99784 485 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 ABHD6Q9BV23 337 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 GPR88Q9GZN0 384 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 TBC1D17Q9HA65 648 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 OLFML3Q9NRN5 406 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 STK26Q9P289 416 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 RHCGQ9UBD6 479 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.43□□□□□ -1.86
TRAPPC13-204ENST00000438419 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRR32B1ATL7 298 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCER2I3L3R5 266 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 XRCC3O43542 346 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CAVIN2O95810 425 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 NR3C1P04150 777 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 FYNP06241 537 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 QDPRP09417 244 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 NR1D1P20393 614 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 MSH3P20585 1137 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CBLP22681 906 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 DCTP40126 519 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCR10P46092 362 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 RAB28P51157 221 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 THOP1P52888 689 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 PNRC1Q12796 327 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRKAA1Q13131 559 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCDC184Q52MB2 194 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 TECRLQ5HYJ1 363 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 ARMC4Q5T2S8 1044 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 GRTP1Q5TC63 336 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 RBPMS2Q6ZRY4 209 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CENPVQ7Z7K6 275 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 THNSL1Q8IYQ7 743 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CPSF7Q8N684 471 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 XXYLT1Q8NBI6 393 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 OR2AJ1Q8NGZ0 328 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 KIF18AQ8NI77 898 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 TM9SF4Q92544 642 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 CFAP57Q96MR6 1250 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 GBP5Q96PP8 586 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 LMF2Q9BU23 707 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 FNDC11Q9BVV2 318 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 NUP85Q9BW27 656 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 EDEM3Q9BZQ6 932 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 DPAGT1Q9H3H5 408 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 NOL11Q9H8H0 719 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 IL17BQ9UHF5 180 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC24A2Q9UI40 661 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 ACAD8Q9UKU7 415 aa3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 NOL7Q9UMY1 257 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-204ENST00000438419 A0A1W2PRB8 838 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANKUB1A6NFN9 424 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 HEPACAM2A8MVW5 462 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms