RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 VAV2P52735 878 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 TMPRSS15P98073 1019 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 XIAPP98170 497 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 MRPL49Q13405 166 aaKnown RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 RAPSNQ13702 412 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 TCEAL1Q15170 157 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 TAF1AQ15573 450 aaPredicted RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 EIF2S3LQ2VIR3 472 aaKnown RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 PTCHD3Q3KNS1 767 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 PLEKHN1Q494U1 663 aaPredicted RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 ZNF789Q5FWF6 425 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 DESI1Q6ICB0 168 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 FAM198BQ6UWH4 519 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 MICALCLQ6ZW33 695 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 VASH1Q7L8A9 365 aaPredicted RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 RCOR2Q8IZ40 523 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 ZBTB2Q8N680 514 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 RBMXL3Q8N7X1 1067 aaKnown RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 ACVR1CQ8NER5 493 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 LCN9Q8WX39 176 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 DCUN1D1Q96GG9 259 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 FERD3LQ96RJ6 166 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 VAT1Q99536 393 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 APOL2Q9BQE5 337 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 CCM2Q9BSQ5 444 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 HEMGNQ9BXL5 484 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 TEX15Q9BXT5 2789 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 SRMSQ9H3Y6 488 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 GOLPH3Q9H4A6 298 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 ASB8Q9H765 288 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 ACTR5Q9H9F9 607 aaPredicted RBP4.29□□□□□ -1.72
LINC01239-202ENST00000436786 SLAMF7Q9NQ25 335 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 C1GALT1Q9NS00 363 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 PCMTD2Q9NV79 361 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 MAP10Q9P2G4 905 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 TRHDEQ9UKU6 1024 aa4.29□□□□□ -1.72
LINC01239-202ENST00000436786 LRRK2Q5S007 2527 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 hCG_1818297A0A087WSY0 165 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CCDC66A2RUB6 948 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 KLHL33A6NCF5 533 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 C2orf81A6NN90 581 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 HACD1B0YJ81 288 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 H7C0C1 242 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 BTN3A1O00481 513 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PSTPIP1O43586 416 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 TPM3P06753 285 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PVRP15151 417 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CYP2A7P20853 494 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 NDUFS1P28331 727 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 RBL1P28749 1068 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ADRA1AP35348 466 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ATP5OP48047 213 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 MARCKSL1P49006 195 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CDKN1CP49918 316 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 GEMP55040 296 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 DHX9Q08211 1270 aaKnown RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PRKAA1Q13131 559 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 MSLNQ13421 630 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ATP1A4Q13733 1029 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 TRIM14Q14142 442 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ZNF658BQ4V348 819 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 TFDP3Q5H9I0 405 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 SLC6A19Q695T7 634 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 RANBP10Q6VN20 620 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CDHR3Q6ZTQ4 885 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 MED25Q71SY5 747 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 SYTL1Q8IYJ3 562 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 KATNAL2Q8IYT4 538 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 GLIS1Q8NBF1 620 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PRR7Q8TB68 274 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 RBM41Q96IZ5 413 aaKnown RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 LINC00615Q96LM1 132 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 TRAPPC9Q96Q05 1148 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PITPNM3Q9BZ71 974 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 GBA3Q9H227 469 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 XKR8Q9H6D3 395 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 COG4Q9H9E3 785 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 FANCEQ9HB96 536 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ABHD10Q9NUJ1 306 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CUEDC1Q9NWM3 386 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 CRLS1Q9UJA2 301 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 SERTAD3Q9UJW9 196 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PCDHGB7Q9Y5F8 929 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 HEBP2Q9Y5Z4 205 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ALG6Q9Y672 507 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 USP9YO00507 2555 aaPredicted RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 DOPEY2Q9Y3R5 2298 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 PCSK5Q92824 1860 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 TNRC6AQ8NDV7 1962 aaKnown RBP4.28□□□□□ -1.72
LINC01239-202ENST00000436786 RELNP78509 3460 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 C5orf60A6NFR6 353 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 AGAP14A8MT82 685 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 E7EQ34 232 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 MATN2O00339 956 aa4.28□□□□□ -1.72
LINC01239-202ENST00000436786 ZNF749O43361 778 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms