RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ANKDD1AQ495B1 522 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 CACHD1Q5VU97 1274 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 KIAA1841Q6NSI8 718 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 GCNT7Q6ZNI0 430 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 THAP5Q7Z6K1 395 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ZBTB46Q86UZ6 589 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 AADATQ8N5Z0 425 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ZBTB2Q8N680 514 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 FNDC8Q8TC99 324 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
CD44-209ENST00000433892 FAM162AQ96A26 154 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ULK4Q96C45 1275 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SDCCAG3Q96C92 435 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 SLC47A1Q96FL8 570 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 ABCG8Q9H221 673 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 LRTM1Q9HBL6 345 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 INVSQ9Y283 1065 aa11.57□□□□□ -0.56
CD44-209ENST00000433892 K7EPI3 171 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 SLC28A1O00337 649 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CPNE6O95741 557 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 BPIP17213 487 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ACRV1P26436 265 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 HNF1BP35680 557 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 PIGAP37287 484 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ALDH7A1P49419 539 aaKnown RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 BNIP3Q12983 259 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ARHGEF7Q14155 803 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CHRNA6Q15825 494 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 GPRC6AQ5T6X5 926 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 XKR5Q6UX68 686 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ZNF783Q6ZMS7 281 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TRIM46Q7Z4K8 759 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 R3HCC1LQ7Z5L2 792 aaKnown RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ADGRG2Q8IZP9 1017 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 C8orf59Q8N0T1 100 aaPredicted RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 SLC43A3Q8NBI5 491 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 OR13F1Q8NGS4 319 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 MIPOL1Q8TD10 442 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 AURKBQ96GD4 344 aaPredicted RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CLSTN3Q9BQT9 956 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 VN1R3Q9BXE9 311 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 FAM118AQ9NWS6 357 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 DNAJB9Q9UBS3 223 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CRLS1Q9UJA2 301 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 PCDHGA8Q9Y5G5 932 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 GLYATL1P3A0A0U1RQE8 302 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 MANBAO00462 879 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CXCR6O00574 342 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 AREL1O15033 823 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TRBC1P01850 177 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 IL6P05231 212 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 EPB42P16452 691 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ZNF182P17025 639 aaPredicted RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 PRKACGP22612 351 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 CRHBPP24387 322 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 AP1S1P61966 158 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ZXDBP98169 803 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 BCL2L1Q07817 233 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 MAD2L1Q13257 205 aaPredicted RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 CPSF6Q16630 551 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD44-209ENST00000433892 BROXQ5VW32 411 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 XAF1Q6GPH4 301 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 SPESP1Q6UW49 350 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 C10orf111Q8N326 155 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TERB1Q8NA31 727 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 GLB1L3Q8NCI6 653 aaPredicted RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 OR10Q1Q8NGQ4 319 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TBC1D15Q8TC07 691 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 NCLNQ969V3 563 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 ALG14Q96F25 216 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 MBOAT4Q96T53 435 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 TUBA1CQ9BQE3 449 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 MRPL9Q9BYD2 267 aaKnown RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 AMBRA1Q9C0C7 1298 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 PAIP1Q9H074 479 aaKnown RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 CLMPQ9H6B4 373 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 AFF4Q9UHB7 1163 aaKnown RBP11.56□□□□□ -0.56
CD44-209ENST00000433892 GMEB1Q9Y692 573 aa11.56□□□□□ -0.56
CD44-209ENST00000433892 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 SH3PXD2BA1X283 911 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 ARVCFO00192 962 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 NOL3O60936 208 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 HPRP00739 348 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 BCKDHAP12694 445 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TPD52P55327 224 aaPredicted RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 MEP1AQ16819 746 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 DUS1LQ6P1R4 473 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 TSPAN33Q86UF1 283 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 EGFL6Q8IUX8 553 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms