RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 NEDD8Q15843 81 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF805Q5CZA5 627 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 HID1Q8IV36 788 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AQP12AQ8IXF9 295 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 OR13C4Q8NGS5 318 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 PPM1MQ96MI6 270 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 LARS2Q15031 903 aaKnown RBP11.33□□□□□ -0.59
PTCH1-208ENST00000430669 PDCD4Q53EL6 469 aaKnown RBP11.33□□□□□ -0.59
PTCH1-208ENST00000430669 C19orf18Q8NEA5 215 aa11.33□□□□□ -0.59
PTCH1-208ENST00000430669 SLC13A3Q8WWT9 602 aa11.33□□□□□ -0.59
PTCH1-208ENST00000430669 PCDHGA2Q9Y5H1 932 aa11.33□□□□□ -0.59
PTCH1-208ENST00000430669 C4BPBP20851 252 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 FAM174BQ3ZCQ3 159 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 IRAK1BP1Q5VVH5 260 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 LRRC66Q68CR7 880 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 VITQ6UXI7 678 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PLEKHM3Q6ZWE6 761 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 FBRSQ9HAH7 460 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CD84Q9UIB8 345 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 MCM8Q9UJA3 840 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PRDM4Q9UKN5 801 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PLK4O00444 970 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 RFPL1O75677 317 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF37AP17032 561 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 GRIA1P42261 906 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 C2orf80Q0P641 193 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 SLC9B1Q4ZJI4 515 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 LRRC58Q96CX6 371 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF382Q96SR6 550 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 WDR26Q9H7D7 661 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ACSL5Q9ULC5 683 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 NIPSNAP2O75323 286 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 EBLN1P0CF75 366 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ACRV1P26436 265 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 WNT7BP56706 349 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 EOGTQ5NDL2 527 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 OR7A2PQ8NGA2 310 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 SLITRK2Q9H156 845 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CACNA2D2Q9NY47 1150 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 POMPQ9Y244 141 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 MYOFQ9NZM1 2061 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ACTR3P61158 418 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 TRAF3Q13114 568 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 RAB33AQ14088 237 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ADGRE1Q14246 886 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 APOLD1Q96LR9 279 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 AASDHPPTQ9NRN7 309 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 VPS29Q9UBQ0 182 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 RSL24D1Q9UHA3 163 aaKnown RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 TIMM22Q9Y584 194 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 FOXO6A8MYZ6 492 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PTGES3LE9PB15 166 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 H0Y858 1186 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CLCN4P51793 760 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CCNHP51946 323 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CYP4F3Q08477 520 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF776Q68DI1 518 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 METTL2BQ6P1Q9 378 aaKnown RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PACRGLQ8N7B6 248 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 BPIFB1Q8TDL5 484 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 IRF7Q92985 503 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 COL26A1Q96A83 441 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 IL12RB2Q99665 862 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 CD244Q9BZW8 370 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 MRPS30Q9NP92 439 aaKnown RBP11.33□□□□□ -0.6
PTCH1-208ENST00000430669 SNX7Q9UNH6 387 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 SIP14410 1827 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 A0A0D9SEW6 157 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 ACRP10323 421 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 IGDCC3Q8IVU1 814 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 RIT1Q92963 219 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 RGMAQ96B86 450 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
PTCH1-208ENST00000430669 OR4F21O95013 312 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TSPAN19P0C672 248 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 RAP2AP10114 183 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 BMP7P18075 431 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 KHKP50053 298 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 RPS14P62263 151 aaKnown RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 CHRNA6Q15825 494 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TAZQ16635 292 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 FRG2Q64ET8 278 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 FATE1Q969F0 183 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 FRG2BQ96QU4 278 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SPATA9Q9BWV2 254 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 NDOR1Q9UHB4 597 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms