RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SOX13Q9UN79 622 aa9.88□□□□□ -0.83
ATG4B-211ENST00000429899 PCDHGA6Q9Y5G7 932 aa9.88□□□□□ -0.83
ATG4B-211ENST00000429899 MN1Q10571 1320 aaPredicted RBP9.87□□□□□ -0.83
ATG4B-211ENST00000429899 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.87□□□□□ -0.83
ATG4B-211ENST00000429899 TSPAN11A1L157 253 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 PRSS38A1L453 326 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 SDR42E2A6NKP2 422 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 AGPSO00116 658 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 TNFRSF10CO14798 259 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 SPAG6O75602 509 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 PGLSO95336 258 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 GSTA2P09210 222 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 CD1EP15812 388 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 BPIP17213 487 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 CA4P22748 312 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 SSTR1P30872 391 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 NPY2RP49146 381 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 RPS18P62269 152 aaKnown RBP9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ZNF844Q08AG5 666 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 DNASE1L3Q13609 305 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 FRG1Q14331 258 aaKnown RBP9.87□□□□□ -0.83
ATG4B-211ENST00000429899 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 CRYMQ14894 314 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 AGERQ15109 404 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 LYSMD3Q7Z3D4 306 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ZSWIM9Q86XI8 627 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 DNAAF3Q8N9W5 541 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 FDCSPQ8NFU4 85 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 OR2W6PQ8NHA6 318 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 MDFIQ99750 246 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 NAT9Q9BTE0 207 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 KIFC1Q9BW19 673 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 NUDT9Q9BW91 350 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ING2Q9H160 280 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ACTL8Q9H568 366 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ACSS3Q9H6R3 686 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 ZC3H7BQ9UGR2 993 aaKnown RBP9.87□□□□□ -0.83
ATG4B-211ENST00000429899 KLHL3Q9UH77 587 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 CHKBQ9Y259 395 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 NTNG1Q9Y2I2 539 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 TCAF1Q9Y4C2 921 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 PCDHGC4Q9Y5F7 938 aa9.87□□□□□ -0.83
ATG4B-211ENST00000429899 A0A087WUV0 522 aaPredicted RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 ZCWPW2A0A1B0GU75 182 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 FAM237BA0A1B0GVD1 139 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TCRBV9S1A1TA0A576 114 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CACNB4O00305 520 aaPredicted RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CEACAM4O75871 244 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 USP1O94782 785 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 POP4O95707 220 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 RECKO95980 971 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 PDHA1P08559 390 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TPH1P17752 444 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 SERPINA4P29622 427 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 LIG3P49916 1009 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 RPL26P61254 145 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 GPLD1P80108 840 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 IL10RAQ13651 578 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 POU6F1Q14863 301 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 EFTUD2Q15029 972 aaKnown RBP eCLIP9.86□□□□□ -0.831e-6■■□□□ 11.9
ATG4B-211ENST00000429899 QPCTQ16769 361 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 ALS2CLQ60I27 953 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CAPN12Q6ZSI9 719 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TAOK1Q7L7X3 1001 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 FJX1Q86VR8 437 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CAMK1DQ8IU85 385 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 ZNF295-AS1Q8N0V1 137 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 NXPE1Q8N323 547 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 SLC25A41Q8N5S1 370 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 LPCAT1Q8NF37 534 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 UHMK1Q8TAS1 419 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CT55Q8WUE5 264 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 PIH1D2Q8WWB5 315 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CFAP36Q96G28 342 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 SH3GL2Q99962 352 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TMEM109Q9BVC6 243 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 ATP13A3Q9H7F0 1226 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 AKIRIN1Q9H9L7 192 aaPredicted RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CARS2Q9HA77 564 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 TREX1Q9NSU2 369 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 EURLQ9NYK6 297 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 RPL26L1Q9UNX3 145 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 PLEKHM1Q9Y4G2 1056 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 PCDHGB7Q9Y5F8 929 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 SPO11Q9Y5K1 396 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 COPG1Q9Y678 874 aaKnown RBP9.86□□□□□ -0.83
ATG4B-211ENST00000429899 MAD1L1Q9Y6D9 718 aa9.86□□□□□ -0.83
ATG4B-211ENST00000429899 CNTRLQ7Z7A1 2325 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 PCM1Q15154 2024 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 TRBV23OR9-2A0A075B6M9 112 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 MROH6A6NGR9 719 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 A6NL46 340 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 LDB2O43679 373 aa9.85□□□□□ -0.83
ATG4B-211ENST00000429899 CEACAM5P06731 702 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms