RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 AGO1Q9UL18 857 aaKnown RBP8.55□□□□□ -1.04
GABPB1-205ENST00000429662 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 MED16Q9Y2X0 877 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 DHRS7Q9Y394 339 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 TIMM22Q9Y584 194 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 SLC30A1Q9Y6M5 507 aa8.55□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 A0A1B0GTW7 788 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ANKRD66B4E2M5 251 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 H3BNC9 293 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 PRMT5O14744 637 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GSTA4O15217 222 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 LINC01565O15544 149 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 TLR5O60602 858 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SEC14L2O76054 403 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 OR4F21O95013 312 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 TSPAN12O95859 305 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GLUD1P00367 558 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 IL6P05231 212 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 RHOCP08134 193 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 MTHFD1P11586 935 aaKnown RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CCNA2P20248 432 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CHRM3P20309 590 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 HRH2P25021 359 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GSTM2P28161 218 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GPR15P49685 360 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF177Q13360 481 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 PMS2P3Q13401 168 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 TMED1Q13445 227 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 TGFBIQ15582 683 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 FUT11Q495W5 492 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 TIGD2Q4W5G0 525 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ZRANB3Q5FWF4 1079 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CDKL4Q5MAI5 379 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CACHD1Q5VU97 1274 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SDHAF4Q5VUM1 108 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 KLHL35Q6PF15 583 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CYP20A1Q6UW02 462 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 DLEU7Q6UYE1 221 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 Q6ZSR9 355 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 IFNEQ86WN2 208 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ZDHHC13Q8IUH4 622 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 C8orf59Q8N0T1 100 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SMYD1Q8NB12 490 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 DDHD1Q8NEL9 900 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 MDGA1Q8NFP4 955 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 OR13F1Q8NGS4 319 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GRIN3AQ8TCU5 1115 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SH3RF2Q8TEC5 729 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 RNF145Q96MT1 663 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 RBM4BQ9BQ04 359 aaKnown RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 RBM4Q9BWF3 364 aaKnown RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 NACA2Q9H009 215 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ING2Q9H160 280 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 P2RY12Q9H244 342 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 CWH43Q9H720 699 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SMPD4Q9NXE4 827 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 IFT80Q9P2H3 777 aaPredicted RBP8.54□□□□□ -1.04
GABPB1-205ENST00000429662 KLHL42Q9P2K6 505 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GALPQ9UBC7 116 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GIMAP2Q9UG22 337 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 EBF1Q9UH73 591 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 GNPTGQ9UJJ9 305 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 B3GNT3Q9Y2A9 372 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 PKP3Q9Y446 797 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 SPO11Q9Y5K1 396 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 RAI2Q9Y5P3 530 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 PTGDR2Q9Y5Y4 395 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 ST14Q9Y5Y6 855 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 LOC400499M0QZD8 3231 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 PLXNA4Q9HCM2 1894 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 MYO10Q9HD67 2058 aa8.54□□□□□ -1.04
GABPB1-205ENST00000429662 A0A1B0GVM2 712 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MTMR11A4FU01 709 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SLC38A8A6NNN8 435 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 H3BMQ9 156 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 LSM1O15116 133 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MRPS14O60783 128 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SEC24DO94855 1032 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 LATS1O95835 1130 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TBX18O95935 607 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 F11P03951 625 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 HMBSP08397 361 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GNAO1P09471 354 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 NELFEP18615 380 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 DGKAP23743 735 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MAP4P27816 1152 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 CASP2P42575 452 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GALK1P51570 392 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 C21orf59P57076 290 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ERVPABLB-1P60509 514 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ECT2LQ008S8 904 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SIGLEC14Q08ET2 396 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SMAD4Q13485 552 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GTF2H2Q13888 395 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms