RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MVB12BQ9H7P6 319 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SLC24A2Q9UI40 661 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 KLK13Q9UKR3 277 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 NFS1Q9Y697 457 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 RASSF9O75901 435 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 SYF2O95926 243 aaKnown RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 MYBL2P10244 700 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 SPRP35270 261 aaPredicted RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 GP5P40197 560 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 RGS4P49798 205 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 USP10Q14694 798 aaKnown RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 GRTP1Q5TC63 336 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 KLHL35Q6PF15 583 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 CYS1Q717R9 158 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 TRMT10CQ7L0Y3 403 aaKnown RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 RELL1Q8IUW5 271 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 TBC1D21Q8IYX1 336 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 OR52E1Q8NGJ3 308 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 GIMAP7Q8NHV1 300 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 OLFM1Q99784 485 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 RHOJQ9H4E5 214 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 CAB39LQ9H9S4 337 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 HRASLS2Q9NWW9 162 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 TMEM9Q9P0T7 183 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 POLG2Q9UHN1 485 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 CORO1CQ9ULV4 474 aaPredicted RBP14.17□□□□□ -0.14
SGCE-204ENST00000428696 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
SGCE-204ENST00000428696 A0A087WUV0 522 aaPredicted RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 GSAPA4D1B5 854 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 NTN3O00634 580 aaPredicted RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 CAPN5O15484 640 aaPredicted RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 DKK1O94907 266 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 ADRB1P08588 477 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 POLR2CP19387 275 aaPredicted RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 MAP4P27816 1152 aaKnown RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 BDKRB1P46663 353 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 EPHA4P54764 986 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 INHBCP55103 352 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 IL2P60568 153 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 VSNL1P62760 191 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 PRKAA1Q13131 559 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 ZNF460Q14592 562 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 NR1D2Q14995 579 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 FAM92BQ6ZTR7 304 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 RAPH1Q70E73 1250 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 TMPRSS7Q7RTY8 843 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 ERMP1Q7Z2K6 904 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 PIWIL4Q7Z3Z4 852 aaKnown RBP14.16□□□□□ -0.14
SGCE-204ENST00000428696 TMPRSS9Q7Z410 1059 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 B3GNT8Q7Z7M8 397 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 GALNT7Q86SF2 657 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 AMIGO1Q86WK6 493 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 PLXDC1Q8IUK5 500 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 RCBTB1Q8NDN9 531 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 OR5K2Q8NHB8 316 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 CD200R1Q8TD46 325 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 ZFPM2Q8WW38 1151 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 RSC1A1Q92681 617 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 LINGO1Q96FE5 620 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 STRADBQ9C0K7 418 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 UCK1Q9HA47 277 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 MED16Q9Y2X0 877 aa14.16□□□□□ -0.14
SGCE-204ENST00000428696 D6RAR5 112 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 KDM1AO60341 852 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TCEA3O75764 348 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 INHBAP08476 426 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 MSH2P43246 934 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TAS2R39P59534 338 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CFHR1Q03591 330 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TSTA3Q13630 321 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 ISXQ2M1V0 245 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 MROH9Q5TGP6 573 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 UNC5DQ6UXZ4 953 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 OOSP2Q86WS3 158 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 MYO1HQ8N1T3 1032 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 LMNTD1Q8N9Z9 388 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ZDHHC12Q96GR4 267 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TMEM74Q96NL1 305 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 RBBP8Q99708 897 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 OGFRQ9NZT2 677 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 KLHL42Q9P2K6 505 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ZFC3H1O60293 1989 aaKnown RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 RP1P56715 2156 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 IGHV5-10-1A0A0J9YXX1 117 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 EXOC1LA0A1B0GW35 172 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 KRT87PA6NCN2 255 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 PABPN1LA6NDY0 278 aaKnown RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 RIPK2O43353 540 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 C1orf105O95561 183 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CATP04040 527 aaKnown RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 CBSLP0DN79 551 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ENO3P13929 434 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 FDXRP22570 491 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CSF2RBP32927 897 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CBSP35520 551 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms