RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 BRD3Q15059 726 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 NR6A1Q15406 480 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 ZIC1Q15915 447 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 BBS12Q6ZW61 710 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 MED25Q71SY5 747 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 AMIGO1Q86WK6 493 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 CARFQ8N187 725 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 GLIS1Q8NBF1 620 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 ACTL9Q8TC94 416 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 TCTN2Q96GX1 697 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.16
VARS-216ENST00000428445 RANBP9Q96S59 729 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 COPS8Q99627 209 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 SMAD5Q99717 465 aaKnown RBP16.02■□□□□ 0.16
VARS-216ENST00000428445 C19orf43Q9BQ61 176 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 FERMT1Q9BQL6 677 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 PITPNM3Q9BZ71 974 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 ZBTB20Q9HC78 741 aaPredicted RBP16.02■□□□□ 0.16
VARS-216ENST00000428445 ASF1BQ9NVP2 202 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 HEBP2Q9Y5Z4 205 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 PRSS21Q9Y6M0 314 aa16.02■□□□□ 0.16
VARS-216ENST00000428445 UNC79Q9P2D8 2635 aa16.02■□□□□ 0.15
VARS-216ENST00000428445 MACROD2A1Z1Q3 448 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 CCDC78A2IDD5 438 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 KCNN4O15554 427 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 CLDN1O95832 211 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 RALBP11234 206 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 ZRANB3Q5FWF4 1079 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 TAS2R42Q7RTR8 314 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 SNX20Q7Z614 316 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 SERPINA9Q86WD7 417 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 FAM20CQ8IXL6 584 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 TMEM102Q8N9M5 508 aaPredicted RBP16.01■□□□□ 0.15
VARS-216ENST00000428445 LMNTD1Q8N9Z9 388 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 OR5AR1Q8NGP9 310 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 TFGQ92734 400 aaPredicted RBP16.01■□□□□ 0.15
VARS-216ENST00000428445 PNPLA2Q96AD5 504 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 TFB2MQ9H5Q4 396 aaKnown RBP16.01■□□□□ 0.15
VARS-216ENST00000428445 PIH1D1Q9NWS0 290 aaKnown RBP16.01■□□□□ 0.15
VARS-216ENST00000428445 SPHK1Q9NYA1 384 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 ZDHHC3Q9NYG2 299 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 ERRFI1Q9UJM3 462 aaPredicted RBP16.01■□□□□ 0.15
VARS-216ENST00000428445 PLAGL1Q9UM63 463 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 ICKQ9UPZ9 632 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
VARS-216ENST00000428445 PCDHGB7Q9Y5F8 929 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 CRYBG3Q68DQ2 2970 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 ANKRD12Q6UB98 2062 aa16.01■□□□□ 0.15
VARS-216ENST00000428445 C17orf113A0A1B0GUU1 675 aa16■□□□□ 0.15
VARS-216ENST00000428445 C2orf74A8MZ97 194 aa16■□□□□ 0.15
VARS-216ENST00000428445 APOC4-APOC2K7ER74 178 aa16■□□□□ 0.15
VARS-216ENST00000428445 IFRD1O00458 451 aaPredicted RBP16■□□□□ 0.15
VARS-216ENST00000428445 CNOT3O75175 753 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 CRTAMO95727 393 aa16■□□□□ 0.15
VARS-216ENST00000428445 APOC2P02655 101 aa16■□□□□ 0.15
VARS-216ENST00000428445 TPBGLP0DKB5 382 aa16■□□□□ 0.15
VARS-216ENST00000428445 ITGALP20701 1170 aa16■□□□□ 0.15
VARS-216ENST00000428445 EIF3EP60228 445 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 ITPRIPL1Q6GPH6 555 aa16■□□□□ 0.15
VARS-216ENST00000428445 UNC5AQ6ZN44 842 aa16■□□□□ 0.15
VARS-216ENST00000428445 PIANPQ8IYJ0 282 aa16■□□□□ 0.15
VARS-216ENST00000428445 INPP5DQ92835 1189 aa16■□□□□ 0.15
VARS-216ENST00000428445 ULK4Q96C45 1275 aa16■□□□□ 0.15
VARS-216ENST00000428445 SGSM3Q96HU1 749 aa16■□□□□ 0.15
VARS-216ENST00000428445 CALR3Q96L12 384 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 TBL1YQ9BQ87 522 aa16■□□□□ 0.15
VARS-216ENST00000428445 DHCR7Q9UBM7 475 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 CDYLQ9Y232 598 aa16■□□□□ 0.15
VARS-216ENST00000428445 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
VARS-216ENST00000428445 AAR2Q9Y312 384 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 PTRH2Q9Y3E5 179 aaKnown RBP16■□□□□ 0.15
VARS-216ENST00000428445 ITPR2Q14571 2701 aa16■□□□□ 0.15
VARS-216ENST00000428445 C9J4A7 227 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 AKR1B15C9JRZ8 316 aaPredicted RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 H3BMH7 237 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 MATN2O00339 956 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 ZNF189O75820 626 aaPredicted RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 CBX6O95503 412 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 RBP3P10745 1247 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 UGT2B7P16662 529 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 AGXTP21549 392 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 ACRV1P26436 265 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 GABRA4P48169 554 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 RRADP55042 308 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 COPS2P61201 443 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 BOP1Q14137 746 aaKnown RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 PRPSAP1Q14558 356 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 DARS2Q6PI48 645 aaKnown RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 SARM1Q6SZW1 724 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 SPESP1Q6UW49 350 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 MRGPREQ86SM8 312 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 TAB3Q8N5C8 712 aaPredicted RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 OR2A14Q96R47 310 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 SYTL2Q9HCH5 934 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 CUEDC1Q9NWM3 386 aaPredicted RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 G3BP2Q9UN86 482 aaKnown RBP15.99■□□□□ 0.15
VARS-216ENST00000428445 KLHL20Q9Y2M5 609 aa15.99■□□□□ 0.15
VARS-216ENST00000428445 PCDHA13Q9Y5I0 950 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms