RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 BIRC8Q96P09 236 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 FAM167BQ9BTA0 163 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TUBB2BQ9BVA1 445 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 TBC1D10AQ9BXI6 508 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 FAM129AQ9BZQ8 928 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 PDE7BQ9NP56 450 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 IMP3Q9NV31 184 aaKnown RBP8.89□□□□□ -0.99
SMC1A-203ENST00000428014 PISDQ9UG56 409 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
SMC1A-203ENST00000428014 IGSF10Q6WRI0 2623 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PRAMEF33A0A0G2JMD5 474 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 FAM187AA6NFU0 413 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 C2orf74A8MZ97 194 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 E7ESA3 106 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 KIF2AO00139 706 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 EIF3HO15372 352 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PRAMEF10O60809 474 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 NDUFS3O75489 264 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 MATN4O95460 622 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CD63P08962 238 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CBSLP0DN79 551 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SFTPCP11686 197 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PGAM1P18669 254 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 MGAT1P26572 445 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CBSP35520 551 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SKIV2L2P42285 1042 aaKnown RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PTGIRP43119 386 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CDKN1CP49918 316 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 RAB28P51157 221 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SESN2P58004 480 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 TUBB4BP68371 445 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 MC1RQ01726 317 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 RELAQ04206 551 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PPP1R7Q15435 360 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 TCEA2Q15560 299 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 KYNUQ16719 465 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 LONRF1Q17RB8 773 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PLA2G4EQ3MJ16 856 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 FAM182AQ5T1J6 154 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 NKAIN2Q5VXU1 208 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 ARMC6Q6NXE6 501 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 AMIGO1Q86WK6 493 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PPP1R3BQ86XI6 285 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 NLGN4XQ8N0W4 816 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PDIK1LQ8N165 341 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 NLGN4YQ8NFZ3 816 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 DENND1AQ8TEH3 1009 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 LCN9Q8WX39 176 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 ELMO1Q92556 727 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 RSC1A1Q92681 617 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 USP7Q93009 1102 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 RAD51AP1Q96B01 352 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 CATSPER2Q96P56 530 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 DPH2Q9BQC3 489 aaPredicted RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SRMSQ9H3Y6 488 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SYNDIG1Q9H7V2 258 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 HRASLS2Q9NWW9 162 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SYBUQ9NX95 663 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 TRMT1Q9NXH9 659 aaKnown RBP8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SLC39A1Q9NY26 324 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SLC2A6Q9UGQ3 507 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 PCDHGA6Q9Y5G7 932 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 SDK2Q58EX2 2172 aa8.88□□□□□ -0.99
SMC1A-203ENST00000428014 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TCRBV7S3A2A0A539 114 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 EFCAB7A8K855 629 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 C21orf140B9A014 251 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 KLK10O43240 276 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SEC31AO94979 1220 aaKnown RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 VAPBO95292 243 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 S1PR4O95977 384 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 HBQ1P09105 142 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ERGP11308 486 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 CCL4P13236 92 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ITIH1P19827 911 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 NMBRP28336 390 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 CCR7P32248 378 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ETV5P41161 510 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 LEPRP48357 1165 aaKnown RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 DR1Q01658 176 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 CAV1Q03135 178 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 KRT33BQ14525 404 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 PLCL1Q15111 1095 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SEPT7Q16181 437 aaKnown RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SLC5A12Q1EHB4 618 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TTLL9Q3SXZ7 439 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SYTL3Q4VX76 610 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SPANXN3Q5MJ09 141 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 DNTTIP2Q5QJE6 756 aaKnown RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 CACHD1Q5VU97 1274 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 YOD1Q5VVQ6 348 aaPredicted RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 STEAP4Q687X5 459 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 HIBCHQ6NVY1 386 aaPredicted RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TTC23LQ6PF05 361 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 DET1Q7L5Y6 550 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 RASGRP3Q8IV61 690 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms