RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 POLR1BQ9H9Y6 1135 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 POLR3BQ9NW08 1133 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 OSER1Q9NX31 292 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 FAM159BA6NKW6 160 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MYO1GB0I1T2 1018 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 C2CD4DB7Z1M9 353 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TRIM24O15164 1050 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SERPINI2O75830 405 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ALBP02768 609 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ATF6P18850 670 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CDH5P33151 784 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 GRIA3P42263 894 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SERPINB10P48595 397 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 RAB10P61026 200 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 IRF9Q00978 393 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SEMA5AQ13591 1074 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF460Q14592 562 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SLC9B1Q4ZJI4 515 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 OTUD3Q5T2D3 398 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 NCEH1Q6PIU2 408 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC81Q6ZN84 652 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 PTGR2Q8N8N7 351 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CHFRQ96EP1 664 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SLC17A9Q9BYT1 436 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 KPNA4O00629 521 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC159P0C7I6 412 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 GTF2E2P29084 291 aaKnown RBP10.46□□□□□ -0.73
TCOF1-204ENST00000427724 CLCN5P51795 746 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 LIMK2P53671 638 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 RALGDSQ12967 914 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 LSAMPQ13449 338 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 CHRNA6Q15825 494 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 LSM12Q3MHD2 195 aaKnown RBP10.46□□□□□ -0.73
TCOF1-204ENST00000427724 FBXO48Q5FWF7 155 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 C6orf183Q5T699 404 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 MSANTD2Q6P1R3 559 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 FBXO27Q8NI29 283 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 LINC01599Q8WXQ3 324 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 CLP1Q92989 425 aaKnown RBP10.46□□□□□ -0.73
TCOF1-204ENST00000427724 DACT3Q96B18 629 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-204ENST00000427724 USP29Q9HBJ7 922 aa10.46□□□□□ -0.73
TCOF1-204ENST00000427724 KLF11O14901 512 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 KDELR3O43731 214 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 APOA1P02647 267 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 LTA4HP09960 611 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 SCNN1AP37088 669 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PIK3CGP48736 1102 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 MPP1Q00013 466 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 DPYSL2Q16555 572 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 IL27RAQ6UWB1 636 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 FRMD7Q6ZUT3 714 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 UBALD2Q8IYN6 164 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ZCCHC7Q8N3Z6 543 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 DNAJC5GQ8N7S2 189 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 FAM47BQ8NA70 645 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 TRPC4APQ8TEL6 797 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 NRG4Q8WWG1 115 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 NXNL1Q96CM4 212 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PTCD3Q96EY7 689 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 GPR21Q99679 349 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 TEX12Q9BXU0 123 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 IRF2BPLQ9H1B7 796 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PCDH12Q9NPG4 1184 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ERVK-11Q9UQG0 969 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ARL5AQ9Y689 179 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 MYH9P35579 1960 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 FAM186AA6NE01 2351 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 A0A0J9YVX5 310 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 FAM86C2PA6NEL3 165 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ANKRD66B4E2M5 251 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 TSPAN6O43657 245 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 AP2A1O95782 977 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 HOXD8P13378 290 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ATP5F1P24539 256 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PRKCHP24723 683 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 NMBRP28336 390 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 NSG1P42857 185 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PRKAA2P54646 552 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 CLDN10P78369 228 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ATAD3BQ5T9A4 648 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 RTL10Q7L3V2 364 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 RABEPKQ7Z6M1 372 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 CLDN19Q8N6F1 224 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 DLG3Q92796 817 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 FAM162AQ96A26 154 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF599Q96NL3 588 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 AIF1LQ9BQI0 150 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 GBA3Q9H227 469 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 RHOJQ9H4E5 214 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 IL21RQ9HBE5 538 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 KIF17Q9P2E2 1029 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 RPS6KB2Q9UBS0 482 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 ITGB1BP2Q9UKP3 347 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 PRPF19Q9UMS4 504 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 SATB2Q9UPW6 733 aa10.46□□□□□ -0.74
TCOF1-204ENST00000427724 TNPO3Q9Y5L0 923 aaKnown RBP10.46□□□□□ -0.74
TCOF1-204ENST00000427724 TRAFD1O14545 582 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 GLDCP23378 1020 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms