RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PRKCDQ05655 676 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 ASTN1O14525 1302 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 SPATA31A5Q5VU36 1347 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 SPATA31A7Q8IWB4 1347 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 C2P06681 752 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 SMSP52788 366 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 IL23RQ5VWK5 629 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 C12orf50Q8NA57 414 aaPredicted RBP14.21□□□□□ -0.13
PTPN13-203ENST00000427191 PLD4Q96BZ4 506 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 TSSK3Q96PN8 268 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 LGMNQ99538 433 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 SLC25A51Q9H1U9 297 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 ARL8BQ9NVJ2 186 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CNOT6Q9ULM6 557 aaKnown RBP14.21□□□□□ -0.13
PTPN13-203ENST00000427191 MYPNQ86TC9 1320 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CYP11A1P05108 521 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 RHOQP17081 205 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 BLKP51451 505 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CDH12P55289 794 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 HSD17B12Q53GQ0 312 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 ALG10BQ5I7T1 473 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 NKD2Q969F2 451 aaPredicted RBP14.21□□□□□ -0.13
PTPN13-203ENST00000427191 GDAP2Q9NXN4 497 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CD72P21854 359 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 AFF1P51825 1210 aaKnown RBP14.21□□□□□ -0.14
PTPN13-203ENST00000427191 SIM2Q14190 667 aaPredicted RBP14.21□□□□□ -0.14
PTPN13-203ENST00000427191 FASTKD3Q14CZ7 662 aaKnown RBP14.21□□□□□ -0.14
PTPN13-203ENST00000427191 ZACNQ401N2 412 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 SH3RF1Q7Z6J0 888 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF565Q8N9K5 539 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 CORO1BQ9BR76 489 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 NDC1Q9BTX1 674 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 TM6SF2Q9BZW4 377 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 RANBP3Q9H6Z4 567 aaPredicted RBP14.21□□□□□ -0.14
PTPN13-203ENST00000427191 SLCO1B3Q9NPD5 702 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 MAB21L2Q9Y586 359 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 UGT2B10P36537 528 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 SLC15A1P46059 708 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 ZBED5Q49AG3 693 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 ACAT2Q9BWD1 397 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 IPPKQ9H8X2 491 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 UNKLQ9H9P5 680 aaKnown RBP14.21□□□□□ -0.14
PTPN13-203ENST00000427191 CDH10Q9Y6N8 788 aa14.21□□□□□ -0.14
PTPN13-203ENST00000427191 GRM5P41594 1212 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 CDK10Q15131 360 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 LPCAT4Q643R3 524 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 MECRQ9BV79 373 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 MKS1Q9NXB0 559 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 HSD11B1P28845 292 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 XKP51811 444 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 IDI2Q9BXS1 227 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 POLR2J2Q9GZM3 115 aaKnown RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 TMEM184CQ9NVA4 438 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 POLR3BQ9NW08 1133 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 DNAJB5O75953 348 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 NPPAP01160 153 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 PAQR7Q86WK9 346 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 TMEM121BQ9BXQ6 578 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 H0YGN5 161 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 TAS2R50P59544 299 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 RFTN1Q14699 578 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 ALG1LQ6GMV1 187 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 HSDL2Q6YN16 418 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 SLC13A3Q8WWT9 602 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 ASB9Q96DX5 294 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 POLR2J3Q9H1A7 115 aaKnown RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 A0A0J9YVX5 310 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 MPSTP25325 297 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 LCN1P31025 176 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 PBX3P40426 434 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 FGL1Q08830 312 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 SLC10A7Q0GE19 358 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 RNASE12Q5GAN4 147 aaKnown RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 S100A16Q96FQ6 103 aaKnown RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 FCRL2Q96LA5 508 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 LRRC72A6NJI9 287 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 CYP3A5P20815 502 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 AQP1P29972 269 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 ARFRP1Q13795 201 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 SMURF1Q9HCE7 757 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 RCBTB2O95199 551 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 NDUFS1P28331 727 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 C10orf62Q5T681 223 aaPredicted RBP14.2□□□□□ -0.14
PTPN13-203ENST00000427191 NIPAL1Q6NVV3 410 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 WASF2Q9Y6W5 498 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 ERCC6L2Q5T890 1561 aa14.2□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF627Q7L945 461 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 C2orf15Q8WU43 125 aaKnown RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 LPGAT1Q92604 370 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 B3GNT4Q9C0J1 378 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 A0A075B6Q4 140 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 PI15O43692 258 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TARDBPQ13148 414 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 KLHL6Q8WZ60 621 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 MIPEPQ99797 713 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms