RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ZNF843Q8N446 348 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZSCAN1Q8NBB4 408 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 SLC45A3Q96JT2 553 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 TRIT1Q9H3H1 467 aaKnown RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 AKIRIN1Q9H9L7 192 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 C1GALT1Q9NS00 363 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 FGF21Q9NSA1 209 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 ASF1AQ9Y294 204 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 BTRCQ9Y297 605 aa17.79■□□□□ 0.44
SMARCAL1-205ENST00000425815 CES2O00748 559 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 KIF5CO60282 957 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ITGB2P05107 769 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 AOAHP28039 575 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 PPARGP37231 505 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 TTPAP49638 278 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 PLOD1Q02809 727 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ACY1Q03154 408 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 PRKAA1Q13131 559 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 GPR19Q15760 415 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 AARS2Q5JTZ9 985 aaKnown RBP17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 TBC1D21Q8IYX1 336 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 SLC22A15Q8IZD6 547 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ESX1Q8N693 406 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 MCUQ8NE86 351 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 OR5K2Q8NHB8 316 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 FLVCR1-AS1Q8TAF5 88 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ZNF501Q96CX3 271 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 BIRC8Q96P09 236 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 NAP1L3Q99457 506 aaPredicted RBP17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 PITPNM3Q9BZ71 974 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 PDE7BQ9NP56 450 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ACTR10Q9NZ32 417 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 ANAPC5Q9UJX4 755 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 RARRES3Q9UL19 164 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 RPS6KL1Q9Y6S9 549 aa17.78■□□□□ 0.44
SMARCAL1-205ENST00000425815 GSAPA4D1B5 854 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 PHF2O75151 1096 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 SLCO2B1O94956 709 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 ST6GAL1P15907 406 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 RPS3P23396 243 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 TUBB4BP68371 445 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 HSPA14Q0VDF9 509 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 TUBB2AQ13885 445 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 BPHLQ86WA6 291 aaPredicted RBP17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 NAT8LQ8N9F0 302 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 SERPINB12Q96P63 405 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 FCRL4Q96PJ5 515 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 TRAPPC9Q96Q05 1148 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 TUBB2BQ9BVA1 445 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 GPN2Q9H9Y4 310 aaPredicted RBP17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 SPHK1Q9NYA1 384 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 MRPS18BQ9Y676 258 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-205ENST00000425815 GOLGA8MH3BSY2 632 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 MATN2O00339 956 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 NTRK1P04629 796 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 MLNP12872 115 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 PVRP15151 417 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 CDH3P22223 829 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 MAGEA3P43357 314 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 FNTAP49354 379 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 ARL4DP49703 201 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 SARNPP82979 210 aaKnown RBP17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 ABRQ12979 859 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 GRB7Q14451 532 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 TYSND1Q2T9J0 566 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 SYTL3Q4VX76 610 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 CTSL3PQ5NE16 218 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 PRAMEF17Q5VTA0 474 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 KIAA0930Q6ICG6 404 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 SLC38A9Q8NBW4 561 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 ASZ1Q8WWH4 475 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 OR2A14Q96R47 310 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 MENTQ9BUN1 341 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 KLHL25Q9H0H3 589 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 KCND1Q9NSA2 647 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 IL1RAPL1Q9NZN1 696 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 POLG2Q9UHN1 485 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 LNPEPQ9UIQ6 1025 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 CROTQ9UKG9 612 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 PLAGL1Q9UM63 463 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 TDRKHQ9Y2W6 561 aaKnown RBP17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 CFAP46Q8IYW2 2715 aa17.76■□□□□ 0.43
SMARCAL1-205ENST00000425815 ZCWPW2A0A1B0GU75 182 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 SDR42E2A6NKP2 422 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 ZNF891A8MT65 544 aaPredicted RBP17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 C2orf74A8MZ97 194 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 NDUFS3O75489 264 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 PEBP1P30086 187 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 C19orf57Q0VDD7 668 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 ANKRD20A4Q4UJ75 823 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 DNAJC21Q5F1R6 531 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 ZNF789Q5FWF6 425 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 ARMC3Q5W041 872 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 PTRHD1Q6GMV3 140 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 CENPUQ71F23 418 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 TMEM135Q86UB9 458 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 LMNTD1Q8N9Z9 388 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 LPGAT1Q92604 370 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 MED8Q96G25 268 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms