RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CYB5D1Q6P9G0 228 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 DRICH1Q6PGQ1 229 aaPredicted RBP12.38□□□□□ -0.43
SGCE-203ENST00000425444 C4orf22Q6V702 233 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 CLDN19Q8N6F1 224 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
SGCE-203ENST00000425444 OR6P1Q8NGX9 317 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 ELMO2Q96JJ3 720 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 OR6C1Q96RD1 312 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 RANBP9Q96S59 729 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 RAB33BQ9H082 229 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 KIR3DX1Q9H7L2 352 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 HOMER3Q9NSC5 361 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 HRASLS2Q9NWW9 162 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 SIDT1Q9NXL6 827 aaKnown RBP12.38□□□□□ -0.43
SGCE-203ENST00000425444 EPHA6Q9UF33 1036 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 SLC2A6Q9UGQ3 507 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 PILRAQ9UKJ1 303 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 TCAF1Q9Y4C2 921 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 UBA6A0AVT1 1052 aaPredicted RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 OR5K3A6NET4 321 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 F8W8V4 182 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 GOT2P00505 430 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 FTH1P02794 183 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 GSTM1P09488 218 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 MAP4P27816 1152 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 FOXN2P32314 431 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 KCNJ1P48048 391 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 PREPP48147 710 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 TERF1P54274 439 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 PPP1CAP62136 330 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 SH3BP2P78314 561 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 GSTM4Q03013 218 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 PRKAA1Q13131 559 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 KRTAP21-3Q3LHN1 58 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 FASTKD1Q53R41 847 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 LYPLAL1Q5VWZ2 237 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 NLRP9Q7RTR0 991 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 RASGRP3Q8IV61 690 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 SIDT2Q8NBJ9 832 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 ZFPM2Q8WW38 1151 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 ELMO1Q92556 727 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 UBXN4Q92575 508 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 FERD3LQ96RJ6 166 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 ULBP3Q9BZM4 244 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 EIF2B3Q9NR50 452 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 ANAPC5Q9UJX4 755 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 RIMKLBQ9ULI2 386 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 DRG1Q9Y295 367 aaKnown RBP12.37□□□□□ -0.43
SGCE-203ENST00000425444 ABCA2Q9BZC7 2435 aa12.37□□□□□ -0.43
SGCE-203ENST00000425444 GSAPA4D1B5 854 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 OR6C74A6NCV1 312 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 TLCD2A6NGC4 264 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 AP3B1O00203 1094 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 OR56A5P0C7T3 313 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 PPARGP37231 505 aaPredicted RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 ARCN1P48444 511 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 VPS41P49754 854 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 RPA4Q13156 261 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 IL11RAQ14626 422 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 BRD3Q15059 726 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 TRIP13Q15645 432 aaPredicted RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 AARS2Q5JTZ9 985 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 ACVR1CQ8NER5 493 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 OR4L1Q8NH43 312 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 LCN9Q8WX39 176 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 KLHL6Q8WZ60 621 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 CD180Q99467 661 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 MAP3K3Q99759 626 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 HGH1Q9BTY7 390 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 TRIT1Q9H3H1 467 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 JRKLQ9Y4A0 524 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 PRSS21Q9Y6M0 314 aa12.36□□□□□ -0.43
SGCE-203ENST00000425444 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
SGCE-203ENST00000425444 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 IGHV5-51A0A0C4DH38 117 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 ZSCAN12O43309 604 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 RFPL1O75677 317 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 LDLRP01130 860 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 POLR2CP19387 275 aaPredicted RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 PSMA3P25788 255 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PDHA2P29803 388 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 CD151P48509 253 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms