RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF460Q14592 562 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 UAP1L1Q3KQV9 507 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 GPRC6AQ5T6X5 926 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 PSAPL1Q6NUJ1 521 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF549Q6P9A3 640 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 SNX20Q7Z614 316 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 ADGRG6Q86SQ4 1221 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 LDB1Q86U70 411 aaPredicted RBP15.33■□□□□ 0.04
SHOX2-202ENST00000425436 PHYKPLQ8IUZ5 450 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 PIANPQ8IYJ0 282 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.04
SHOX2-202ENST00000425436 VPS35Q96QK1 796 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 TFB2MQ9H5Q4 396 aaKnown RBP15.33■□□□□ 0.04
SHOX2-202ENST00000425436 TRIM39Q9HCM9 518 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 MRGBPQ9NV56 204 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 ATXN10Q9UBB4 475 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 CRLS1Q9UJA2 301 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 PCDHB1Q9Y5F3 818 aa15.33■□□□□ 0.04
SHOX2-202ENST00000425436 PCYT1BQ9Y5K3 369 aaPredicted RBP15.33■□□□□ 0.04
SHOX2-202ENST00000425436 LRP4O75096 1905 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 A0A1B0GTQ1 180 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-202ENST00000425436 PRSS38A1L453 326 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 HDAC3O15379 428 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 SMIM24O75264 130 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 VPS26AO75436 327 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 TNFP01375 233 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 ESR1P03372 595 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 T-ENOLP0DO92 83 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF8P17098 575 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-202ENST00000425436 ITGALP20701 1170 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 GMPRP36959 345 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 ARRB1P49407 418 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-202ENST00000425436 MNAT1P51948 309 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 HK3P52790 923 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 C1orf61Q13536 156 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 NAPRTQ6XQN6 538 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 GATAD2AQ86YP4 633 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 PHACTR4Q8IZ21 702 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 CARS2Q9HA77 564 aaKnown RBP15.32■□□□□ 0.04
SHOX2-202ENST00000425436 TMEM9BQ9NQ34 198 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 TM7SF3Q9NS93 570 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 PNPOQ9NVS9 261 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 UCKL1Q9NWZ5 548 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 ZNHIT2Q9UHR6 403 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 TMCO1Q9UM00 188 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 SUFUQ9UMX1 484 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 TRIM33Q9UPN9 1127 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 SLC17A4Q9Y2C5 497 aa15.32■□□□□ 0.04
SHOX2-202ENST00000425436 GVINP1Q7Z2Y8 2422 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 AGAP14A8MT82 685 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 H3BMM5 538 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 TNFRSF10CO14798 259 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 RASGRP1O95267 797 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 ESRRAP11474 423 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 PKMP14618 531 aaKnown RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 NME1P15531 152 aaKnown RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF37AP17032 561 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 TFEBP19484 476 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 GNPDA1P46926 289 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 RXRGP48443 463 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 IDH3AP50213 366 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 NFKB2Q00653 900 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 TMEM115Q12893 351 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 RIPK1Q13546 671 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 SEMA3AQ14563 771 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 GPR33Q49SQ1 333 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 ARL13AQ5H913 290 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 EPGNQ6UW88 154 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 RAB44Q7Z6P3 723 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-202ENST00000425436 ISCA2Q86U28 154 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 SERPINA9Q86WD7 417 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 STAG3L4Q8TBR4 150 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 DERL2Q9GZP9 239 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 NMUR2Q9GZQ4 415 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 PLEKHM1Q9Y4G2 1056 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 GPSM3Q9Y4H4 160 aa15.31■□□□□ 0.04
SHOX2-202ENST00000425436 SYCE1LA8MT33 242 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 MATN2O00339 956 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF195O14628 629 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 DFNA5O60443 496 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 CDK14O94921 469 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 CELA2BP08218 269 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 CD1DP15813 335 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF7P17097 686 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 IMPDH1P20839 514 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 FMO4P31512 558 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 AKT1P31749 480 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 PRRT3Q5FWE3 981 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 LDLRAP1Q5SW96 308 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 STPG1Q5TH74 334 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 CYB5D1Q6P9G0 228 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 DET1Q7L5Y6 550 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 NXPE1Q8N323 547 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 SLC25A45Q8N413 288 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 OXR1Q8N573 874 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 RASGEF1AQ8N9B8 481 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms