RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RBM4BQ9BQ04 359 aaKnown RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 FDXACB1Q9BRP7 624 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 RBM4Q9BWF3 364 aaKnown RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SYTL2Q9HCH5 934 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 STAP1Q9ULZ2 295 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NAALAD2Q9Y3Q0 740 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 A0A087X1B8 175 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 E5RI56 91 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ACKR2O00590 384 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 TSPAN1O60635 241 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 MAFO75444 373 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 KATNA1O75449 491 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF682O95780 498 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 G6PDP11413 515 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CYP2A7P20853 494 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CREMQ03060 361 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 PTGR1Q14914 329 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SLC25A52Q3SY17 297 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SYT6Q5T7P8 510 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 EFCAB12Q6NXP0 572 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NECAB2Q7Z6G3 386 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ABI3BPQ7Z7G0 1075 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 PPHLN1Q8NEY8 458 aaKnown RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 REPS2Q8NFH8 660 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ZNF583Q96ND8 569 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 ZSCAN5AQ9BUG6 496 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 MKRN2Q9H000 416 aaKnown RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 NDFIP2Q9NV92 336 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 SCN3BQ9NY72 215 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 RNF6Q9Y252 685 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 POLHQ9Y253 713 aa11.09□□□□□ -0.63
SEC61A1-202ENST00000424880 EVPLQ92817 2033 aa11.08□□□□□ -0.63
SEC61A1-202ENST00000424880 RLFQ13129 1914 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 MIA3Q5JRA6 1907 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CIB4A0PJX0 185 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 GJB3O75712 270 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 MED26O95402 600 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 RAB25P57735 213 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 HOXC5Q00444 222 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 POU4F1Q01851 419 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 NOXA1Q86UR1 476 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 EID3Q8N140 333 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CYP4Z2PQ8N1L4 340 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 C2CD4AQ8NCU7 369 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 BRSK1Q8TDC3 778 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 IKZF3Q9UKT9 509 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 PAPSS2O95340 614 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 ACVR2AP27037 513 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CA5AP35218 305 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DEFA1P59665 94 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DEFA3P59666 94 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 RUNDC3AQ59EK9 446 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CCDC71Q8IV32 467 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 GPC2Q8N158 579 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 CACTIN-AS1Q8N1I8 211 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM109AQ8N4B1 249 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 MMP27Q9H306 513 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC6A13Q9NSD5 602 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DDIT4Q9NX09 232 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 DNAJB9Q9UBS3 223 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 ORC6Q9Y5N6 252 aa11.08□□□□□ -0.64
SEC61A1-202ENST00000424880 OR5K3A6NET4 321 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 H3BM21 787 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 M0R082 166 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TSPAN4O14817 238 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 SERPINA1P01009 418 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MYCP01106 439 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 HTR1EP28566 365 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ICAM3P32942 547 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RFX2P48378 723 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TAGLNQ01995 201 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 EMX2Q04743 252 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 INCA1Q0VD86 236 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 GRM1Q13255 1194 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RBBP7Q16576 425 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 YIF1BQ5BJH7 314 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PNCKQ6P2M8 343 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ANKRD46Q86W74 232 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 VANGL1Q8TAA9 524 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 NETO1Q8TDF5 533 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DNASE1L2Q92874 299 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RNF34Q969K3 372 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TRMT61AQ96FX7 289 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms