RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 UROSP10746 265 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 ACVRL1P37023 503 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 PIK3CGP48736 1102 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 MLLT6P55198 1093 aaPredicted RBP14.08□□□□□ -0.15
MSH5-206ENST00000423982 PPIGQ13427 754 aaKnown RBP eCLIP14.08□□□□□ -0.155e-7■■■■□ 21.7
MSH5-206ENST00000423982 PTGR1Q14914 329 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 KCNJ8Q15842 424 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 GTDC1Q4AE62 458 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 BRMS1LQ5PSV4 323 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 TMEM240Q5SV17 173 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 MRNIPQ6NTE8 343 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 PHACTR4Q8IZ21 702 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 SCML4Q8N228 414 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 MFSD4AQ8N468 514 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 SIDT2Q8NBJ9 832 aaKnown RBP14.08□□□□□ -0.15
MSH5-206ENST00000423982 ZNF555Q8NEP9 628 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 FAR1Q8WVX9 515 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 ITPKCQ96DU7 683 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 BARD1Q99728 777 aaKnown RBP14.08□□□□□ -0.15
MSH5-206ENST00000423982 ADGRE2Q9UHX3 823 aa14.08□□□□□ -0.15
MSH5-206ENST00000423982 PNMA8BQ9ULN7 279 aaPredicted RBP14.08□□□□□ -0.15
MSH5-206ENST00000423982 LOC100130705A0A1B0GUX0 176 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 NIPSNAP2O75323 286 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 VPS4BO75351 444 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 TBX18O95935 607 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 UGT2B4P06133 528 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 CNPP09543 421 aaKnown RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 MYOGP15173 224 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 TGM1P22735 817 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 GRIK1P39086 918 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 MYO9BQ13459 2157 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 RFTN2Q52LD8 501 aaPredicted RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 TTC23Q5W5X9 447 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 SPATA2LQ8IUW3 424 aaPredicted RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 C10orf111Q8N326 155 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 OR7A2PQ8NGA2 310 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 TSPEARQ8WU66 669 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 RPL3LQ92901 407 aaKnown RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 IGSF8Q969P0 613 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 AURKBQ96GD4 344 aaPredicted RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 MAGED4Q96JG8 741 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 THUMPD3Q9BV44 507 aaKnown RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 SIAEQ9HAT2 523 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 SPTBN5Q9NRC6 3674 aaKnown RBP14.08□□□□□ -0.16
MSH5-206ENST00000423982 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 DOCK4Q8N1I0 1966 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 VWA8A3KMH1 1905 aa14.08□□□□□ -0.16
MSH5-206ENST00000423982 LOC285095A0A1B0GVY8 99 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 C16orf96A6NNT2 1141 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 TULP3O75386 442 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 FTH1P02794 183 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 PABPC1P11940 636 aaKnown RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SLC13A2Q13183 592 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 RAPSNQ13702 412 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 DDR2Q16832 855 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SPATS1Q496A3 300 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 IL27RAQ6UWB1 636 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 PRR23BQ6ZRT6 265 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 ANKRD13BQ86YJ7 626 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 LGI2Q8N0V4 545 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 Q8N9G6 341 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 MYEOVQ96EZ4 313 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 IGSF21Q96ID5 467 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 NSMCE3Q96MG7 304 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SARS2Q9NP81 518 aaKnown RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 ABCC13Q9NSE7 274 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 COMMD8Q9NX08 183 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SPO11Q9Y5K1 396 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 TRANK1O15050 2925 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 NUP214P35658 2090 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 IQCF5A8MTL0 148 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 GSTA4O15217 222 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 RPP40O75818 363 aaKnown RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 CHEK2O96017 543 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 CAPN1P07384 714 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 CD6P30203 668 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 NKX2-5P52952 324 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 IL5RAQ01344 420 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 CCDC92Q53HC0 331 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 FAM109BQ6ICB4 259 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 CYP20A1Q6UW02 462 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 GPRIN3Q6ZVF9 776 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SLC22A16Q86VW1 577 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 OR2T12Q8NG77 320 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 EEF1AKMT1Q8WVE0 214 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SLC47A1Q96FL8 570 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 ZNF641Q96N77 438 aaPredicted RBP14.07□□□□□ -0.16
MSH5-206ENST00000423982 PPP1R2P1Q96PQ5 205 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 MYOCQ99972 504 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 TTPALQ9BTX7 342 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 ACTR8Q9H981 624 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 SLCO3A1Q9UIG8 710 aa14.07□□□□□ -0.16
MSH5-206ENST00000423982 TYW5A2RUC4 315 aaKnown RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms