RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HDAC10Q969S8 669 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 ZNF501Q96CX3 271 aaPredicted RBP14.75□□□□□ -0.05
USB1-202ENST00000423271 TUBB2BQ9BVA1 445 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 SRMSQ9H3Y6 488 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 XKR8Q9H6D3 395 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 CASS4Q9NQ75 786 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 BTRCQ9Y297 605 aa14.75□□□□□ -0.05
USB1-202ENST00000423271 PHF2O75151 1096 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 GOT2P00505 430 aaKnown RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 CCNYL3P0C7X3 344 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 COILP38432 576 aaPredicted RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 ERV3-1Q14264 604 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 CRTC2Q53ET0 693 aaPredicted RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 PRAMEF17Q5VTA0 474 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 FAM199XQ6PEV8 388 aaPredicted RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 AFTPHQ6ULP2 937 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 ZNF534Q76KX8 674 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 TMEM135Q86UB9 458 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 PTRH1Q86Y79 214 aaKnown RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 OR5AR1Q8NGP9 310 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 ELMO1Q92556 727 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 TFGQ92734 400 aaPredicted RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 FCRL4Q96PJ5 515 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 RANBP9Q96S59 729 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 KLHL25Q9H0H3 589 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 TFB2MQ9H5Q4 396 aaKnown RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 MVB12BQ9H7P6 319 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 PAK5Q9P286 719 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 PADI1Q9ULC6 663 aa14.74□□□□□ -0.05
USB1-202ENST00000423271 SETXQ7Z333 2677 aaKnown RBP14.74□□□□□ -0.05
USB1-202ENST00000423271 ASH1LQ9NR48 2969 aaKnown RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 GOLGA6L10A0A0M3HER8 536 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 LIN7AO14910 233 aaPredicted RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 SUV39H1O43463 412 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 CPNE3O75131 537 aaKnown RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 SCRG1O75711 98 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 GAS8O95995 478 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 MT-ND3P03897 115 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 APRTP07741 180 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 GSTM1P09488 218 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 PVRP15151 417 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ST6GAL1P15907 406 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ADRA1DP25100 572 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 PRDX3P30048 256 aaKnown RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 GSTM4Q03013 218 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ACVR1Q04771 509 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ABRQ12979 859 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 GPS2Q13227 327 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 SEMA3AQ14563 771 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 TMTC4Q5T4D3 741 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ZNF449Q6P9G9 518 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 CCDC137Q6PK04 289 aaKnown RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 BPHLQ86WA6 291 aaPredicted RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 AMIGO1Q86WK6 493 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 TMEM126BQ8IUX1 230 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ADGRF3Q8IZF5 1079 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 CARFQ8N187 725 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 SLC38A9Q8NBW4 561 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 APOBEC4Q8WW27 367 aaKnown RBP14.73□□□□□ -0.05
USB1-202ENST00000423271 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.73□□□□□ -0.05
USB1-202ENST00000423271 C1GALT1Q9NS00 363 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 TUBD1Q9UJT1 453 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 KCND3Q9UK17 655 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 RIMKLBQ9ULI2 386 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 ICKQ9UPZ9 632 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 TCAF1Q9Y4C2 921 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 PCDHGA6Q9Y5G7 932 aa14.73□□□□□ -0.05
USB1-202ENST00000423271 SLC5A10A0PJK1 596 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 CDC14CA4D256 554 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 MATN2O00339 956 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 QSOX1O00391 747 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 FTH1P02794 183 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 ACADLP28330 430 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 CSE1LP55060 971 aaKnown RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 RPS18P62269 152 aaKnown RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 TRIP13Q15645 432 aaPredicted RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 SYTL3Q4VX76 610 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 LDB1Q86U70 411 aaPredicted RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 TRIM73Q86UV7 250 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 OR6P1Q8NGX9 317 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 OR4L1Q8NH43 312 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 C9orf43Q8TAL5 461 aaPredicted RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 LKAAEAR1Q8TD35 194 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 PITPNM3Q9BZ71 974 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 DDX47Q9H0S4 455 aaKnown RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 ACTL8Q9H568 366 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 ZNF71Q9NQZ8 489 aaPredicted RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 ACTR10Q9NZ32 417 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 MARCH4Q9P2E8 410 aaPredicted RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 ASF1AQ9Y294 204 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 PCDHB3Q9Y5E6 796 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 KCNMB2Q9Y691 235 aa14.72□□□□□ -0.05
USB1-202ENST00000423271 SNRNP200O75643 2136 aaKnown RBP14.72□□□□□ -0.05
USB1-202ENST00000423271 SEC16AO15027 2179 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 C21orf140B9A014 251 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 BHMG1C9JSJ3 638 aaPredicted RBP14.71□□□□□ -0.05
USB1-202ENST00000423271 CREG1O75629 220 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 KRT14P02533 472 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 OR56A5P0C7T3 313 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms