RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PAPD7Q5XG87 772 aaKnown RBP16.83■□□□□ 0.28
MSH6-203ENST00000420813 PACS1Q6VY07 963 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 LINC00523Q86TU6 105 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ATCAYQ86WG3 371 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ADGRF3Q8IZF5 1079 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 CLDN19Q8N6F1 224 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 PHC3Q8NDX5 983 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 OR1L3Q8NH93 324 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 TRAPPC9Q96Q05 1148 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ALS2CR12Q96Q35 445 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 DPH2Q9BQC3 489 aaPredicted RBP16.83■□□□□ 0.28
MSH6-203ENST00000420813 HGH1Q9BTY7 390 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 SLC25A23Q9BV35 468 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ING2Q9H160 280 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ACTR5Q9H9F9 607 aaPredicted RBP16.83■□□□□ 0.28
MSH6-203ENST00000420813 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 PCMTD2Q9NV79 361 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 ACTR10Q9NZ32 417 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 SERTAD3Q9UJW9 196 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 SNX7Q9UNH6 387 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 PLAAQ9Y263 795 aa16.83■□□□□ 0.28
MSH6-203ENST00000420813 USP9XQ93008 2570 aaPredicted RBP16.83■□□□□ 0.28
MSH6-203ENST00000420813 SHANK1Q9Y566 2161 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 SPENQ96T58 3664 aaKnown RBP16.82■□□□□ 0.28
MSH6-203ENST00000420813 ERI2A8K979 691 aaKnown RBP16.82■□□□□ 0.28
MSH6-203ENST00000420813 DDX3YO15523 660 aaKnown RBP16.82■□□□□ 0.28
MSH6-203ENST00000420813 FTH1P02794 183 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 HBQ1P09105 142 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 SHMT2P34897 504 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 LMAN1P49257 510 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 PGDP52209 483 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 GDF10P55107 478 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 ITGA1P56199 1179 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 PRAMEF17Q5VTA0 474 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 CPZQ66K79 652 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 SYTL1Q8IYJ3 562 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 ENDOVQ8N8Q3 282 aaKnown RBP16.82■□□□□ 0.28
MSH6-203ENST00000420813 TMEM121Q9BTD3 319 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 SMARCAL1Q9NZC9 954 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 TCFL5Q9UL49 500 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 PCDHGB7Q9Y5F8 929 aa16.82■□□□□ 0.28
MSH6-203ENST00000420813 USP9YO00507 2555 aaPredicted RBP16.82■□□□□ 0.28
MSH6-203ENST00000420813 ARGFXA6NJG6 315 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 E7EQ34 232 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 CEACAM4O75871 244 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 CAPN1P07384 714 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 PTGIRP43119 386 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 MLLT10P55197 1068 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 PLOD1Q02809 727 aaPredicted RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 KIF5AQ12840 1032 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 PRKG2Q13237 762 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 LCN10Q6JVE6 187 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 SPESP1Q6UW49 350 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 FAM198BQ6UWH4 519 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.81■□□□□ 0.28
MSH6-203ENST00000420813 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 SLC7A5P2Q9GIP4 190 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 CHRNA10Q9GZZ6 450 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 POLG2Q9UHN1 485 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 ICKQ9UPZ9 632 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 SPTBN1Q01082 2364 aaKnown RBP16.81■□□□□ 0.28
MSH6-203ENST00000420813 ESPL1Q14674 2120 aa16.81■□□□□ 0.28
MSH6-203ENST00000420813 SPTAN1Q13813 2472 aaKnown RBP16.8■□□□□ 0.28
MSH6-203ENST00000420813 TMEM63AO94886 807 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 PVRP15151 417 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 ACADLP28330 430 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 FOXN2P32314 431 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 CHAF1BQ13112 559 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 NCF4Q15080 339 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 CDHR3Q6ZTQ4 885 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 MICALCLQ6ZW33 695 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 HOOK3Q86VS8 718 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 TBC1D21Q8IYX1 336 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 GPR135Q8IZ08 494 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 FAM26EQ8N5C1 309 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 OR5AR1Q8NGP9 310 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 ELMO1Q92556 727 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 HES6Q96HZ4 224 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 NRTNQ99748 197 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 DHRS4Q9BTZ2 278 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 PIH1D1Q9NWS0 290 aaKnown RBP16.8■□□□□ 0.28
MSH6-203ENST00000420813 RIMKLBQ9ULI2 386 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 ASF1AQ9Y294 204 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 PRSS21Q9Y6M0 314 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 NUP210LQ5VU65 1888 aa16.8■□□□□ 0.28
MSH6-203ENST00000420813 PCM1Q15154 2024 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 PRRC2CQ9Y520 2896 aaKnown RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 SLC5A10A0PJK1 596 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 HEATR9A2RTY3 570 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 C9J4A7 227 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 F8W8V4 182 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 ZNF749O43361 778 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 KDM1AO60341 852 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 FTCDO95954 541 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms