RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SLC8A3P57103 927 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TNNC1P63316 161 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PRAMEP78395 509 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 IRX1P78414 480 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 FOXM1Q08050 763 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ORC2Q13416 577 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 CUL1Q13616 776 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 NFATC4Q14934 902 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 OASLQ15646 514 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 ZKSCAN8Q15776 578 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 SNCBQ16143 134 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PTGISQ16647 500 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CCDC40Q4G0X9 1142 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CDONQ4KMG0 1287 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ZNF585BQ52M93 769 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 LACTB2Q53H82 288 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 HSP90AB3PQ58FF7 597 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 HSP90AA4PQ58FG1 418 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PAPPA-AS1Q5QFB9 102 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CEP85LQ5SZL2 805 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 HYIQ5T013 277 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CFAP58Q5T655 872 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 WLSQ5T9L3 541 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SIGIRRQ6IA17 410 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GALNT17Q6IS24 598 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 KLHL10Q6JEL2 608 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 FAM122CQ6P4D5 195 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 WDR73Q6P4I2 378 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TMEM154Q6P9G4 183 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 KLHL35Q6PF15 583 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 RHBDF2Q6PJF5 856 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GLDNQ6ZMI3 551 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 MFSD6Q6ZSS7 791 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SEPT14Q6ZU15 432 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 DPPA4Q7L190 304 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CACNA2D4Q7Z3S7 1137 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TBC1D10CQ8IV04 446 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 APLFQ8IW19 511 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 TEX11Q8IYF3 940 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GPATCH11Q8N954 259 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SPATA4Q8NEY3 305 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 OR14L1PQ8NHC6 308 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 WFIKKN2Q8TEU8 576 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SCFD2Q8WU76 684 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 NUDCD2Q8WVJ2 157 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 NELFBQ8WX92 580 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ESR2Q92731 530 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SYN2Q92777 582 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 ZKSCAN4Q969J2 545 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 LRRC59Q96AG4 307 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 LRRC45Q96CN5 670 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 RTP4Q96DX8 246 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SCMH1Q96GD3 660 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 RSRC1Q96IZ7 334 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 ATP6V1G3Q96LB4 118 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 C1orf74Q96LT6 269 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CCDC42Q96M95 316 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 AK8Q96MA6 479 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ANKRD27Q96NW4 1050 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ERGIC2Q96RQ1 377 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ACOX2Q99424 681 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 UBAC1Q9BSL1 405 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 NAPBQ9H115 298 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PDZD7Q9H5P4 517 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SH2D4AQ9H788 454 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 WDR26Q9H7D7 661 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CNOT10Q9H9A5 744 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 NHEJ1Q9H9Q4 299 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 PLEKHA5Q9HAU0 1116 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 MMP25Q9NPA2 562 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CD93Q9NPY3 652 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GDF3Q9NR23 364 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SH3GLB2Q9NR46 395 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SEPT11Q9NVA2 429 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 LAMB2P55268 1798 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 KIAA1551Q9HCM1 1747 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 DUOX1Q9NRD9 1551 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MAST2Q6P0Q8 1798 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 RIC1Q4ADV7 1423 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 TNS2Q63HR2 1409 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 A0A0G2JLW4 131 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 C1orf226A1L170 272 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 GMNCA6NCL1 334 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 C5orf60A6NFR6 353 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CFAP73A6NFT4 308 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 BTNL10A8MVZ5 291 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ERVV-2B6SEH9 535 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PROB1E7EW31 1015 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCDC188H7C350 402 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 GTPBP1O00178 669 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 LIN7AO14910 233 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 SCAMP1O15126 338 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 HCRTR2O43614 444 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PTP4A3O75365 173 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 JRKO75564 520 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 RFPL2O75678 378 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 LUC7L3O95232 432 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 CLDN14O95500 239 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZBTB11O95625 1053 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 EGFP01133 1207 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms