RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PCSK2P16519 638 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 TIE1P35590 1138 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GDF5P43026 501 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 MTTPP55157 894 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 ACTR3P61158 418 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GRB7Q14451 532 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 MMEL1Q495T6 779 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 IL27RAQ6UWB1 636 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 HDDC3Q8N4P3 179 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 STMN2Q93045 179 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 CDK15Q96Q40 435 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 BRINP2Q9C0B6 783 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 OR2AG1Q9H205 316 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 ZDHHC4Q9NPG8 344 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 MRPL40Q9NQ50 206 aaKnown RBP16.4■□□□□ 0.22
SSBP3-205ENST00000417664 SCML1Q9UN30 329 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 KLHL33A6NCF5 533 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GPR89AB7ZAQ6 455 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 H3BM21 787 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 K7ESM1 405 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 SLC28A1O00337 649 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GPR89BP0CG08 455 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 DRD1P21728 446 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 WASP42768 502 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 TAS2R38P59533 333 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 RPS14P62263 151 aaKnown RBP16.4■□□□□ 0.22
SSBP3-205ENST00000417664 COQ5Q5HYK3 327 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 C1orf146Q5VVC0 180 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 PNCKQ6P2M8 343 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GK5Q6ZS86 529 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 Q6ZSR9 355 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 KLHDC8AQ8IYD2 350 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 PCYOX1LQ8NBM8 494 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 HM13Q8TCT9 377 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 WDR60Q8WVS4 1066 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 JADE3Q92613 823 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 PPP3R2Q96LZ3 170 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 DPEP2Q9H4A9 486 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 WDR41Q9HAD4 459 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 AIG1Q9NVV5 245 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 ATXN10Q9UBB4 475 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 GPR45Q9Y5Y3 372 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 DNMT3AQ9Y6K1 912 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-205ENST00000417664 TMEM202A6NGA9 273 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 RGS14O43566 566 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 NRP2O60462 931 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 UGDHO60701 494 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 ULK1O75385 1050 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 PCDH8O95206 1070 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 KRT6AP02538 564 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 KRT6BP04259 564 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 KRT6CP48668 564 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 EMX2Q04743 252 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 MAD2L1Q13257 205 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-205ENST00000417664 AAK1Q2M2I8 961 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 PTCHD3Q3KNS1 767 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 PDCD4Q53EL6 469 aaKnown RBP16.39■□□□□ 0.21
SSBP3-205ENST00000417664 C6orf136Q5SQH8 315 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 BNC2Q6ZN30 1099 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-205ENST00000417664 MBOAT1Q6ZNC8 495 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 TRIM46Q7Z4K8 759 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 OR2L2Q8NH16 312 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 ROPN1LQ96C74 230 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 CLPTM1LQ96KA5 538 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 DNAJC11Q9NVH1 559 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 ZIM2Q9NZV7 527 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 NDUFAF1Q9Y375 327 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 TICRRQ7Z2Z1 1910 aa16.39■□□□□ 0.21
SSBP3-205ENST00000417664 DYTNA2CJ06 578 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 ANTXRLA6NF34 631 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 IGLON5A6NGN9 336 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 ARHGEF33A8MVX0 844 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 LOC730098B7Z3J9 87 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 C7P10643 843 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 ABRQ12979 859 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 RPA4Q13156 261 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 LRP8Q14114 963 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-205ENST00000417664 KIAA1161Q6NSJ0 714 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 PAOXQ6QHF9 649 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 RIPOR1Q6ZS17 1223 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 FUNDC1Q8IVP5 155 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 DCBLD1Q8N8Z6 715 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 L3MBTL4Q8NA19 623 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 OR2T11Q8NH01 316 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 EZH1Q92800 747 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-205ENST00000417664 USP7Q93009 1102 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 PRO3102Q9H379 93 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 HEBP1Q9NRV9 189 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 BCAP29Q9UHQ4 241 aa16.38■□□□□ 0.21
SSBP3-205ENST00000417664 MGAT4DA6NG13 374 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 LSM1O15116 133 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 FKBP6O75344 327 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms