RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 REV3LO60673 3130 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 G3V2T6 193 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 HMGA1P17096 107 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 NFKBIAP25963 317 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 HMOX2P30519 316 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 NRIP1P48552 1158 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CD97P48960 835 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 CDH4P55283 916 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 SEMG2Q02383 582 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 GPR17Q13304 367 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 ATP1A4Q13733 1029 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 MOGQ16653 247 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 THAP5Q7Z6K1 395 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 FAM126BQ8IXS8 530 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 RNF175Q8N4F7 328 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 SLC13A3Q8WWT9 602 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 LZICQ8WZA0 190 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 OLA1Q9NTK5 396 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 USE1Q9NZ43 259 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 ADGRE2Q9UHX3 823 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 FCF1Q9Y324 198 aaKnown RBP9.67□□□□□ -0.86
SS18-203ENST00000415083 UNC80Q8N2C7 3258 aa9.67□□□□□ -0.86
SS18-203ENST00000415083 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 C2orf81A6NN90 581 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 E9PQ18 207 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 XPNPEP2O43895 674 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TULP3O75386 442 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SERPINB7O75635 380 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SEC24AO95486 1093 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 EFEMP2O95967 443 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 GLUD1P00367 558 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ALBP02768 609 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 MASP1P48740 699 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CRYBA2P53672 197 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 OXCT1P55809 520 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 FPGSQ05932 587 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ZNF691Q5VV52 312 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SLC24A5Q71RS6 500 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 GALNT10Q86SR1 603 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ADGRG2Q8IZP9 1017 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 LIX1Q8N485 282 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 OR6K2Q8NGY2 324 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CHPT1Q8WUD6 406 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 FAR1Q8WVX9 515 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CPPED1Q9BRF8 314 aaPredicted RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 CIPCQ9C0C6 399 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ZFP14Q9HCL3 533 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 DCAF13Q9NV06 445 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 TYW5A2RUC4 315 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 ZNF840PA6NDX5 716 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SYN3O14994 580 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 YY2O15391 372 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SEPT4O43236 478 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SMAD6O43541 496 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 ZNF821O75541 412 aaPredicted RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 CCNA2P20248 432 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 PAX3P23760 479 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TTPAP49638 278 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 RELAQ04206 551 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CYP2A13Q16696 494 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 RNF219Q5W0B1 726 aaPredicted RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 GLB1LQ6UWU2 654 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 GPR149Q86SP6 731 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TTC16Q8NEE8 873 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ABHD11Q8NFV4 315 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 OR2T12Q8NG77 320 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 BORCS5Q969J3 196 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 UBE2FQ969M7 185 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 MYOCQ99972 504 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 PFDN4Q9NQP4 134 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TMEM45AQ9NWC5 275 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ABCG2Q9UNQ0 655 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 LOC730098B7Z3J9 87 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SLC1A7O00341 560 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 JRKO75564 520 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 EOMESO95936 686 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 HPRP00739 348 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CST1P01037 141 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SEMG1P04279 462 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SLC2A4P14672 509 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 HOXA9P31269 272 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 PTGER3P43115 390 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CLK3P49761 638 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 RAPSNQ13702 412 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SKIV2LQ15477 1246 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 FAM151BQ6UXP7 276 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 RFLNAQ6ZTI6 216 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 TMEM150AQ86TG1 271 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 DCP2Q8IU60 420 aaKnown RBP9.66□□□□□ -0.86
SS18-203ENST00000415083 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SOCS4Q8WXH5 440 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 USP7Q93009 1102 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 MTFMTQ96DP5 389 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms