RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 LRRC20Q8TCA0 184 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 SPATA6Q9NWH7 488 aaPredicted RBP18.2■□□□□ 0.5
SHANK3-202ENST00000414786 TBC1D14Q9P2M4 693 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 CD40LGP29965 261 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 IST1P53990 364 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 PRR5P85299 388 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 GLYATQ6IB77 296 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 OR8K3Q8NH51 312 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 PIWIL2Q8TC59 973 aaKnown RBP18.2■□□□□ 0.5
SHANK3-202ENST00000414786 SLC35G5Q96KT7 338 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 FAM83DQ9H4H8 585 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 FBXO5Q9UKT4 447 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 MAU2Q9Y6X3 613 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 CYP2C18P33260 490 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 SDC2P34741 201 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 PPP4CP60510 307 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 FAPQ12884 760 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 PPM1JQ5JR12 505 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 IL23RQ5VWK5 629 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 XKRXQ6PP77 449 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 VTCN1Q7Z7D3 282 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 BSNDQ8WZ55 320 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 ZNF184Q99676 751 aaPredicted RBP18.2■□□□□ 0.5
SHANK3-202ENST00000414786 EHD4Q9H223 541 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
SHANK3-202ENST00000414786 PCDH18Q9HCL0 1135 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 GRHL1Q9NZI5 618 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
SHANK3-202ENST00000414786 BCKDKO14874 412 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ITGAVP06756 1048 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ATF4P18848 351 aaPredicted RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CDK10Q15131 360 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 NINJ1Q92982 152 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TMEM203Q969S6 136 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 MRM3Q9HC36 420 aaKnown RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 GTF2IRD1Q9UHL9 959 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CIB4A0PJX0 185 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 FADS2P1A8MWK0 482 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CHST10O43529 356 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TMED4Q7Z7H5 227 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 PXYLP1Q8TE99 480 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 FUT8Q9BYC5 575 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 E7ENX8 843 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 SLC3A1Q07837 685 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 UBE2UQ5VVX9 321 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ANKRD23Q86SG2 305 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TRAPPC6BQ86SZ2 158 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 NXPE1Q8N323 547 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 OR6N1Q8NGY5 312 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 C12orf65Q9H3J6 166 aaKnown RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TOR1BO14657 336 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 INHAP05111 366 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TACR2P21452 398 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 XIAPP98170 497 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ENPP2Q13822 863 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 USP30Q70CQ3 517 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 PYCR2Q96C36 320 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TM9SF2Q99805 663 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 NUAK1O60285 661 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 GABBR2O75899 941 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 HEXBP07686 556 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CRTC2Q53ET0 693 aaPredicted RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 VWA5B1Q5TIE3 1220 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CRTC1Q6UUV9 634 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 ZPBP2Q6X784 338 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 PDLIM2Q96JY6 352 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 IL25Q9H293 177 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 MLLT10P55197 1068 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 FIP1L1Q6UN15 594 aaKnown RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 AKAP14Q86UN6 197 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 PNLDC1Q8NA58 520 aaKnown RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CAVIN3Q969G5 261 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 DCBLD2Q96PD2 775 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 DUSP16Q9BY84 665 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 PRDM16Q9HAZ2 1276 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 GLOD4Q9HC38 313 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 CCDC59Q9P031 241 aaKnown RBP18.19■□□□□ 0.5
SHANK3-202ENST00000414786 REV1Q9UBZ9 1251 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TRPS1Q9UHF7 1281 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 TMEM98Q9Y2Y6 226 aa18.19■□□□□ 0.5
SHANK3-202ENST00000414786 H3BQF6 201 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 RPP40O75818 363 aaKnown RBP18.18■□□□□ 0.5
SHANK3-202ENST00000414786 ST3GAL4Q11206 333 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 UGCGQ16739 394 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 YIPF7Q8N8F6 280 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 PCDH19Q8TAB3 1148 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 SMARCD2Q92925 531 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 AZIN2Q96A70 460 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 CIB1Q99828 191 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 NIFKQ9BYG3 293 aaKnown RBP18.18■□□□□ 0.5
SHANK3-202ENST00000414786 MDFIC2A0A1B0GVS7 189 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 LDOC1O95751 146 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-202ENST00000414786 GBAP04062 536 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 FOXK1P85037 733 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 WASHC2DQ5SRD0 308 aa18.18■□□□□ 0.5
SHANK3-202ENST00000414786 ARSKQ6UWY0 536 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms