RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CRLS1Q9UJA2 301 aa9.77□□□□□ -0.85
DDB1-202ENST00000414411 OR1A2Q9Y585 309 aa9.77□□□□□ -0.85
DDB1-202ENST00000414411 CABIN1Q9Y6J0 2220 aa9.77□□□□□ -0.85
DDB1-202ENST00000414411 INPP4BO15327 924 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 OR1I1O60431 355 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 CCNT2O60583 730 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 MYCLP1P12525 358 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 ITPKAP23677 461 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 CCR10P46092 362 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 KPNA2P52292 529 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 YPEL5P62699 121 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ASPHQ12797 758 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 KLF10Q13118 480 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TPRG1LQ5T0D9 272 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 CNSTQ6PJW8 725 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 FRMD7Q6ZUT3 714 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 LSMEM2Q8N112 164 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 GABPB2Q8TAK5 448 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 ACTRT2Q8TDY3 377 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 SNX19Q92543 992 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 SLC6A18Q96N87 628 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 BIRC8Q96P09 236 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 COPS8Q99627 209 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 MRPL57Q9BQC6 102 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 BOCQ9BWV1 1114 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 SHCBP1LQ9BZQ2 653 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 P2RY12Q9H244 342 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 CXorf56Q9H5V9 222 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 GPAMQ9HCL2 828 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TM9SF3Q9HD45 589 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ACSS2Q9NR19 701 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TMEM74BQ9NUR3 256 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 INTS10Q9NVR2 710 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 OAS3Q9Y6K5 1087 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 SLCO1B7G3V0H7 640 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 GRID2O43424 1007 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 SGTAO43765 313 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 RHOBTB1O94844 696 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 FUCA1P04066 466 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 WNT1P04628 370 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 COX4I1P13073 169 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TFEBP19484 476 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ITGAXP20702 1163 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PMLP29590 882 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PPARGP37231 505 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 DHPSP49366 369 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 SLC12A2P55011 1212 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 KIAA1024LP59773 190 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TCF15Q12870 199 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TMEM115Q12893 351 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 SIM2Q14190 667 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 RBM20Q5T481 1227 aaKnown RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 ZNF648Q5T619 568 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 PEAR1Q5VY43 1037 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 LYSMD4Q5XG99 296 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PGM2L1Q6PCE3 622 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 Q6ZSR6 202 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 CEP68Q76N32 757 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ADGRG6Q86SQ4 1221 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TRIM74Q86UV6 250 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 IQCHQ86VS3 1027 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PHYKPLQ8IUZ5 450 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 SPATA6LQ8N4H0 392 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 OR13H1Q8NG92 308 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 HEXDCQ8WVB3 486 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.76□□□□□ -0.851e-9■■■■■ 31.4
DDB1-202ENST00000414411 CNDP1Q96KN2 507 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 TTC1Q99614 292 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PRRX2Q99811 253 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 WDR55Q9H6Y2 383 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 PHPT1Q9NRX4 125 aaPredicted RBP9.76□□□□□ -0.85
DDB1-202ENST00000414411 VTI1BQ9UEU0 232 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ZDHHC2Q9UIJ5 367 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 ANGPTL2Q9UKU9 493 aa9.76□□□□□ -0.85
DDB1-202ENST00000414411 GOLGA8QA0A0J9YX86 632 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 LOC100653049A0A140TA62 436 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 ANKRD33BA6NCL7 494 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 TMEM202A6NGA9 273 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 DLL1O00548 723 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 BCAT2O15382 392 aaPredicted RBP9.75□□□□□ -0.85
DDB1-202ENST00000414411 NPHS1O60500 1241 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 MTX2O75431 263 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 NDUFS3O75489 264 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 KRT34O76011 436 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 CEACAM5P06731 702 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 RPS3P23396 243 aaKnown RBP eCLIP9.75□□□□□ -0.852e-8■■■■□ 22.2
DDB1-202ENST00000414411 CD38P28907 300 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 EPHA3P29320 983 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 NSG1P42857 185 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 RABIFP47224 123 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 CUL3Q13618 768 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 NFATC4Q14934 902 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 LSM12Q3MHD2 195 aaKnown RBP9.75□□□□□ -0.85
DDB1-202ENST00000414411 ZNF549Q6P9A3 640 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 PIWIL4Q7Z3Z4 852 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms