RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MAPKAPK3Q16644 382 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 CCL15Q16663 113 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 PRSS36Q5K4E3 855 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 NADSYN1Q6IA69 706 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 CXCL17Q6UXB2 119 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 BEND5Q7L4P6 421 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF551Q7Z340 670 aaPredicted RBP14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF280BQ86YH2 543 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC13A3Q8WWT9 602 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 RORBQ92753 470 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 BHMTQ93088 406 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 CCSER2Q9H7U1 834 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 SPC25Q9HBM1 224 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 AGO1Q9UL18 857 aaKnown RBP14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 TBX1O43435 398 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 DNTTP04053 509 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 CTPS1P17812 591 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 CLK3P49761 638 aaKnown RBP14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 ZXDBP98169 803 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 TUBA3CQ13748 450 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF691Q5VV52 312 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 VTCN1Q7Z7D3 282 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 OR6K2Q8NGY2 324 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 LKAAEAR1Q8TD35 194 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 TMEM248Q9NWD8 314 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 PKP3Q9Y446 797 aa14.31□□□□□ -0.12
SEMA3F-202ENST00000413852 PLXNB2O15031 1838 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ELOVL7A1L3X0 281 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TTC36A6NLP5 189 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 M0R129 80 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SSX4O60224 188 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 VPS4BO75351 444 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 UGT2B4P06133 528 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 PKMP14618 531 aaKnown RBP14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF140P52738 457 aaPredicted RBP14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 CASP9P55211 416 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 IL2P60568 153 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TSPY1Q01534 308 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SF1Q15637 639 aaKnown RBP14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TEX26Q8N6G2 289 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ARL10Q8N8L6 244 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SLC39A13Q96H72 371 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SERPINB11Q96P15 392 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ADARB2Q9NS39 739 aaKnown RBP14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 HACD3Q9P035 362 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SH3BGRLO75368 114 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ACVR1Q04771 509 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 EPS8Q12929 822 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 KIAA0040Q15053 153 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 AHSA2Q719I0 299 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 ZNF540Q8NDQ6 660 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 NBNO60934 754 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TULP3O75386 442 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SEC22BO75396 215 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 CREG1O75629 220 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SEC24AO95486 1093 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SERPINF2P08697 491 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 DAPP51397 102 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 SGSHP51688 502 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 GTF2H2Q13888 395 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TYSND1Q2T9J0 566 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 GTF2H2CQ6P1K8 395 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 RNF19BQ6ZMZ0 732 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 CHPFQ8IZ52 775 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 CNDP2Q96KP4 475 aaKnown RBP14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 EGLN2Q96KS0 407 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 OR52E6Q96RD3 313 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 TLR6Q9Y2C9 796 aa14.3□□□□□ -0.12
SEMA3F-202ENST00000413852 PRLP01236 227 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 FGF1P05230 155 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 GDF6Q6KF10 455 aaPredicted RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 RASAL3Q86YV0 1011 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 GPR150Q8NGU9 434 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 TADA1Q96BN2 335 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 TSSK3Q96PN8 268 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 RBM4BQ9BQ04 359 aaKnown RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 RBM4Q9BWF3 364 aaKnown RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 UGT2B28Q9BY64 529 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 C6orf62Q9GZU0 229 aaPredicted RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 MUC13Q9H3R2 512 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 PALMDQ9NP74 551 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 VPS26AO75436 327 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 VIPP01282 170 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 DBTP11182 482 aaKnown RBP14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 IGFBP5P24593 272 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 TACR1P25103 407 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 CRISP3P54108 245 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 CDC42EP1Q00587 391 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 TP53BP2Q13625 1128 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 CLCA4Q14CN2 919 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 FXNQ16595 210 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 PHKG1Q16816 387 aa14.29□□□□□ -0.12
SEMA3F-202ENST00000413852 P2RY8Q86VZ1 359 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms