RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 IMP3Q9NV31 184 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 MAGEB17A8MXT2 336 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 STX16-NPEPL1H3BU86 382 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 STX16O14662 325 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF432O94892 652 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 NFATC1O95644 943 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC7A1P30825 629 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 FSTL1Q12841 308 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 KLHL35Q6PF15 583 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 USP43Q70EL4 1123 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 OAFQ86UD1 273 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC30A8Q8IWU4 369 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 GALNT12Q8IXK2 581 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 RASSF1Q9NS23 344 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 PCDHGC4Q9Y5F7 938 aa13.52□□□□□ -0.25
SMARCA4-202ENST00000413806 EEFSECP57772 596 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CHIT1Q13231 466 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ACSBG2Q5FVE4 666 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 DCST1Q5T197 706 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF730Q6ZMV8 503 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 VANGL1Q8TAA9 524 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 DNAJB9Q9UBS3 223 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 PDE10AQ9Y233 779 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF99A8MXY4 864 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CCL22O00626 93 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ERVK-8P63133 956 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 IRF9Q00978 393 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 LARS2Q15031 903 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 PTGES3Q15185 160 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 GARNL3Q5VVW2 1013 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CYP4V2Q6ZWL3 525 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ADGRG2Q8IZP9 1017 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 KAT8Q9H7Z6 458 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 NMUR1Q9HB89 426 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 NALCNQ8IZF0 1738 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 KCPQ6ZWJ8 1503 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 IDSP22304 550 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 AQP1P29972 269 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 PACRGLQ8N7B6 248 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 OR5K1Q8NHB7 308 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 RUVBL1Q9Y265 456 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 TCRBV7S3A2A0A539 114 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ERN1O75460 977 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CCNB2O95067 398 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 OR5F1O95221 314 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CLCN2P51788 898 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 RPS14P62263 151 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CENPSQ8N2Z9 138 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC43A3Q8NBI5 491 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 AKAP1Q92667 903 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 PCBD2Q9H0N5 130 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC6A15Q9H2J7 730 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 CALML5Q9NZT1 146 aa13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 FCF1Q9Y324 198 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-202ENST00000413806 APODP05090 189 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 CCR10P46092 362 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 SLC18A2Q05940 514 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 BNIP3Q12983 259 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 DEFB115Q30KQ5 88 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 COLEC12Q5KU26 742 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 CIR1Q86X95 450 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 ASB9Q96DX5 294 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 H3BSA7 217 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 PSKH1P11801 424 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 PLA2G4EQ3MJ16 856 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 TIFABQ6ZNK6 161 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 SNX20Q7Z614 316 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 RAD51AP1Q96B01 352 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 ZNF347Q96SE7 839 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 HEPHQ9BQS7 1158 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 C1orf21Q9H246 121 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 MED11Q9P086 117 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 CLEC4AQ9UMR7 237 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 MID1O15344 667 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 SEPT4O43236 478 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 STBD1O95210 358 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 APOC1P02654 83 aa13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 PSMA1P25786 263 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-202ENST00000413806 PIK3R6Q5UE93 754 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms