RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ICKQ9UPZ9 632 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 CDYLQ9Y232 598 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 TDRKHQ9Y2W6 561 aaKnown RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 TMEM184BQ9Y519 407 aaPredicted RBP14.39□□□□□ -0.11
LIMS4-201ENST00000413601 ZFYVE26Q68DK2 2539 aa14.39□□□□□ -0.11
LIMS4-201ENST00000413601 PCM1Q15154 2024 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 GPC4O75487 556 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 APOA4P06727 396 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 TPBGLP0DKB5 382 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 ZNF28P17035 718 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 CDH3P22223 829 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 RPS3P23396 243 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIMS4-201ENST00000413601 FMO4P31512 558 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 ARL4DP49703 201 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 HSD11B2P80365 405 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 PTK6Q13882 451 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 TYSND1Q2T9J0 566 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 KIAA1614Q5VZ46 1190 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 NEPROQ6NW34 567 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 LRRC6Q86X45 466 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 KMT5CQ86Y97 462 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 RASGRP3Q8IV61 690 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 TBC1D21Q8IYX1 336 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 ADGRF3Q8IZF5 1079 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 NLGN4XQ8N0W4 816 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 NLGN4YQ8NFZ3 816 aaPredicted RBP14.38□□□□□ -0.11
LIMS4-201ENST00000413601 OR5K2Q8NHB8 316 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 SIGLEC10Q96LC7 697 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 BIRC8Q96P09 236 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 UBL7Q96S82 380 aaPredicted RBP14.38□□□□□ -0.11
LIMS4-201ENST00000413601 ULBP3Q9BZM4 244 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 POLG2Q9UHN1 485 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 POMT2Q9UKY4 750 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 CRYL1Q9Y2S2 319 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 RPS6KL1Q9Y6S9 549 aa14.38□□□□□ -0.11
LIMS4-201ENST00000413601 ZCWPW2A0A1B0GU75 182 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 SLC9B1P1A6NJY1 282 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 MATN2O00339 956 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 DNALI1O14645 258 aaPredicted RBP14.37□□□□□ -0.11
LIMS4-201ENST00000413601 SLCO2B1O94956 709 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 ZBTB11O95625 1053 aaPredicted RBP14.37□□□□□ -0.11
LIMS4-201ENST00000413601 F7P08709 466 aaPredicted RBP14.37□□□□□ -0.11
LIMS4-201ENST00000413601 SPTBP11277 2137 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 FGF5P12034 268 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 LIFP15018 202 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 IVDP26440 423 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 PRDX3P30048 256 aaKnown RBP14.37□□□□□ -0.11
LIMS4-201ENST00000413601 ABRQ12979 859 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 TUBB3Q13509 450 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 TMED2Q15363 201 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 ZNF789Q5FWF6 425 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 CTSL3PQ5NE16 218 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 UNC5AQ6ZN44 842 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 CENPUQ71F23 418 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 TMEM135Q86UB9 458 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 CILP2Q8IUL8 1156 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
LIMS4-201ENST00000413601 D2HGDHQ8N465 521 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 CFAP61Q8NHU2 1237 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 LPGAT1Q92604 370 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 PANX3Q96QZ0 392 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 TCF12Q99081 682 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 PDE7BQ9NP56 450 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 PLAGL1Q9UM63 463 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 PCDHGA4Q9Y5G9 962 aa14.37□□□□□ -0.11
LIMS4-201ENST00000413601 IGSF10Q6WRI0 2623 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 MGAQ8IWI9 3026 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 C2orf74A8MZ97 194 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 PFDN6O15212 129 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 NIPSNAP2O75323 286 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 BANF1O75531 89 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 SPAG6O75602 509 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 USP1O94782 785 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 KIAA0754O94854 1291 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 TIAF1O95411 115 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 DLGAP3O95886 979 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 S1PR4O95977 384 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 OGNP20774 298 aaKnown RBP14.36□□□□□ -0.11
LIMS4-201ENST00000413601 MAP4P27816 1152 aaKnown RBP14.36□□□□□ -0.11
LIMS4-201ENST00000413601 SHMT2P34897 504 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 DR1Q01658 176 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 RHDQ02161 417 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 THOC5Q13769 683 aaKnown RBP14.36□□□□□ -0.11
LIMS4-201ENST00000413601 GPR19Q15760 415 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 DNAJC21Q5F1R6 531 aaKnown RBP14.36□□□□□ -0.11
LIMS4-201ENST00000413601 RNF187Q5TA31 235 aaPredicted RBP14.36□□□□□ -0.11
LIMS4-201ENST00000413601 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 ZNF470Q6ECI4 717 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 CYB5D1Q6P9G0 228 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 OTOAQ7RTW8 1153 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 PCGF5Q86SE9 256 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 PPP1R3BQ86XI6 285 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 UNC5BQ8IZJ1 945 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 CARFQ8N187 725 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 ZSCAN1Q8NBB4 408 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 FAM136AQ96C01 138 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms