RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ANKS6Q68DC2 871 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 METTL2BQ6P1Q9 378 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ENPP7Q6UWV6 458 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 UNC5DQ6UXZ4 953 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CHST15Q7LFX5 561 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 WDR75Q8IWA0 830 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 SLC22A18ASQ8N1D0 253 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TCAIMQ8N3R3 496 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 FBXO15Q8NCQ5 510 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 CADM4Q8NFZ8 388 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 MCOLN3Q8TDD5 553 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 AGAP11Q8TF27 550 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 OR1E3Q8WZA6 343 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 SNX19Q92543 992 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 EDAQ92838 391 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ESAMQ96AP7 390 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 FBXL8Q96CD0 374 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 HIST1H2AHQ96KK5 128 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 RMDN2Q96LZ7 410 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 FOPNLQ96NB1 174 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 UHRF1Q96T88 793 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 HIST1H2AJQ99878 128 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 H2AFJQ9BTM1 129 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TMEM120AQ9BXJ8 343 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TRIM54Q9BYV2 358 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 SHCBP1LQ9BZQ2 653 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ZDHHC5Q9C0B5 715 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ILKAPQ9H0C8 392 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 OCEL1Q9H607 264 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 CARS2Q9HA77 564 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 KCNK13Q9HB14 408 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ZBTB26Q9HCK0 441 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TNFRSF12AQ9NP84 129 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 SEMA4BQ9NPR2 832 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 PRMT8Q9NR22 394 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 KLC4Q9NSK0 619 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 KLQ9UEF7 1012 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 ZDHHC2Q9UIJ5 367 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 MOSPD1Q9UJG1 213 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 PNMA8BQ9ULN7 279 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 KCNK6Q9Y257 313 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 ARL2BPQ9Y2Y0 163 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 TNPO3Q9Y5L0 923 aaKnown RBP6.49□□□□□ -1.37
VPS41-204ENST00000413141 SLCO1B1Q9Y6L6 691 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 USH1CQ9Y6N9 552 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 EML5Q05BV3 1969 aa6.49□□□□□ -1.37
VPS41-204ENST00000413141 A0A1B0GTL3 188 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 ERICH4A6NGS2 130 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 METTL12A8MUP2 240 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 MEI4A8MW99 385 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 SLCO1B7G3V0H7 640 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 MYO1CO00159 1063 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 MATN2O00339 956 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 PPP6CO00743 305 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 ZNF195O14628 629 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 TNFRSF10CO14798 259 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 DCXO43602 365 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 CCNT2O60583 730 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 KCNJ13O60928 360 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 STK16O75716 305 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 C1orf105O95561 183 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 MLYCDO95822 493 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 JUNP05412 331 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 THEGLP0DJG4 465 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 TDGF1P13385 188 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 BCKDHBP21953 392 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 CD27P26842 260 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 MAP4P27816 1152 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 HOXA6P31267 233 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 GGT5P36269 586 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 RPL14P50914 215 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 ARFIP2P53365 341 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 SRP54P61011 504 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 SH3BP2P78314 561 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 RPL6Q02878 288 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 TRAF3Q13114 568 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 GTF2H2Q13888 395 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 LRP8Q14114 963 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 RBBP7Q16576 425 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 ZSCAN26Q16670 478 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 ZXDCQ2QGD7 858 aaPredicted RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 ALG11Q2TAA5 492 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 CCSMST1Q4G0I0 132 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
VPS41-204ENST00000413141 TJAP1Q5JTD0 557 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 GTF2H2CQ6P1K8 395 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 SLC36A4Q6YBV0 504 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 Q6ZSR6 202 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 LRRC70Q7Z2Q7 622 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 GOLGA7Q7Z5G4 137 aa6.48□□□□□ -1.37
VPS41-204ENST00000413141 DCUN1D3Q8IWE4 304 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms