RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 NAPGQ99747 312 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-204ENST00000412328 WDR83Q9BRX9 315 aaKnown RBP16.88■□□□□ 0.29
HSPG2-204ENST00000412328 PLAC1Q9HBJ0 212 aa16.88■□□□□ 0.29
HSPG2-204ENST00000412328 MDC1Q14676 2089 aaKnown RBP16.88■□□□□ 0.29
HSPG2-204ENST00000412328 ANKRD12Q6UB98 2062 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 PIEZO2Q9H5I5 2752 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 SLCO2B1O94956 709 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 F7P08709 466 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 EBLN1P0CF75 366 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 LIFP15018 202 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 ITGB6P18564 788 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 POLR2CP19387 275 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 PEBP1P30086 187 aaKnown RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 PLOD1Q02809 727 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 IL11RAQ14626 422 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 ANKRD20A4Q4UJ75 823 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 SYTL3Q4VX76 610 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 LRRC6Q86X45 466 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 CILP2Q8IUL8 1156 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 PPIL6Q8IXY8 311 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 TBC1D21Q8IYX1 336 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 LCN9Q8WX39 176 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 ANP32BQ92688 251 aaKnown RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 ZNF669Q96BR6 464 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-204ENST00000412328 CAPZA3Q96KX2 299 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 TTC1Q99614 292 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 XKR8Q9H6D3 395 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 GNPTGQ9UJJ9 305 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 MED16Q9Y2X0 877 aa16.87■□□□□ 0.29
HSPG2-204ENST00000412328 ERVH48-1M5A8F1 160 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 MATN2O00339 956 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 C1QL1O75973 258 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 STAT5AP42229 794 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 SARNPP82979 210 aaKnown RBP16.86■□□□□ 0.29
HSPG2-204ENST00000412328 PRKG2Q13237 762 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 TUBB3Q13509 450 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
HSPG2-204ENST00000412328 MSS51Q4VC12 460 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 MANEAQ5SRI9 462 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 AMIGO1Q86WK6 493 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 NLGN4XQ8N0W4 816 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 NLGN4YQ8NFZ3 816 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-204ENST00000412328 ZNF501Q96CX3 271 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-204ENST00000412328 SRMSQ9H3Y6 488 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 ASF1AQ9Y294 204 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 SAR1BQ9Y6B6 198 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 SPENQ96T58 3664 aaKnown RBP16.86■□□□□ 0.29
HSPG2-204ENST00000412328 PCSK5Q92824 1860 aa16.86■□□□□ 0.29
HSPG2-204ENST00000412328 SEC16AO15027 2179 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 LOC101059948A0A1B0GTJ6 334 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 SDR42E2A6NKP2 422 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 NIPSNAP2O75323 286 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 BANF1O75531 89 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 USP1O94782 785 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 ZBTB11O95625 1053 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 MSL3P1P0C860 447 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 ST6GAL1P15907 406 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 PRDX3P30048 256 aaKnown RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 PKLRP30613 574 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 EIF3BP55884 814 aaKnown RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 HSD11B2P80365 405 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 FOXM1Q08050 763 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 HSPA14Q0VDF9 509 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 DHX34Q14147 1143 aaKnown RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 DNAJC21Q5F1R6 531 aaKnown RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 RNF187Q5TA31 235 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 MRNIPQ6NTE8 343 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 HOOK3Q86VS8 718 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 CACNA2D3Q8IZS8 1091 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 C17orf53Q8N3J3 647 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 RNF31Q96EP0 1072 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 SLC12A9Q9BXP2 914 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 TRIT1Q9H3H1 467 aaKnown RBP16.85■□□□□ 0.29
HSPG2-204ENST00000412328 C1GALT1Q9NS00 363 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 SPHK1Q9NYA1 384 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 ANAPC5Q9UJX4 755 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 PLAGL1Q9UM63 463 aa16.85■□□□□ 0.29
HSPG2-204ENST00000412328 TLN1Q9Y490 2541 aaKnown RBP16.84■□□□□ 0.29
HSPG2-204ENST00000412328 SHMT2P34897 504 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 PPARGP37231 505 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-204ENST00000412328 SLC1A2P43004 574 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 GABRA4P48169 554 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 ATP1A2P50993 1020 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 CSE1LP55060 971 aaKnown RBP16.84■□□□□ 0.29
HSPG2-204ENST00000412328 RHDQ02161 417 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 ABHD18Q0P651 414 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 PPP1R7Q15435 360 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 GPR19Q15760 415 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 IZUMO3Q5VZ72 239 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 ZNF470Q6ECI4 717 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 PWWP2BQ6NUJ5 590 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 ZNF549Q6P9A3 640 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 UNC5DQ6UXZ4 953 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 UNC5AQ6ZN44 842 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 PPP1R3BQ86XI6 285 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 SPNS2Q8IVW8 549 aa16.84■□□□□ 0.29
HSPG2-204ENST00000412328 DENND6AQ8IWF6 608 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms