RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KHSRPQ92945 711 aaKnown RBP eCLIP5.15□□□□□ -1.597e-7■■■■□ 19.5
HERC4-205ENST00000412272 TIFAQ96CG3 184 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 LRRC39Q96DD0 335 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 C10orf90Q96M02 699 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PKP2Q99959 881 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 KCTD14Q9BQ13 255 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 HTATIP2Q9BUP3 242 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 REG4Q9BYZ8 158 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 ZNF768Q9H5H4 540 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 KAT8Q9H7Z6 458 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 ARHGAP28Q9P2N2 729 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CDH9Q9ULB4 789 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 MMACHCQ9Y4U1 282 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 DNMT3AQ9Y6K1 912 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 CNTNAP1P78357 1384 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 ROBO2Q9HCK4 1378 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 A0A1B0GVM2 712 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 SCAMP2O15127 329 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 BCAS2O75934 225 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 CNOT4O95628 575 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 MOCS2O96007 188 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 CCNE2O96020 404 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 S100A8P05109 93 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CNTFP26441 200 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 HOXC9P31274 260 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 STAT5BP51692 787 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PER3P56645 1201 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 TROAPQ12815 778 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 TFDP2Q14188 446 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 MFSD10Q14728 455 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 HKDC1Q2TB90 917 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 BTBD16Q32M84 506 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 MGAT5BQ3V5L5 792 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PAGE2BQ5JRK9 111 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 ZNF484Q5JVG2 852 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 SEL1L3Q68CR1 1132 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 SCIMPQ6UWF3 145 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FAM122BQ7Z309 247 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 ARID3BQ8IVW6 561 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 MEIOBQ8N635 442 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FAM47BQ8NA70 645 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 FAM83FQ8NEG4 500 aaPredicted RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 OR10T2Q8NGX3 314 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 DCAKDQ8WVC6 231 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 NR4A3Q92570 626 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 HDAC10Q969S8 669 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CRELD1Q96HD1 420 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 NSMCE2Q96MF7 247 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 DACH2Q96NX9 599 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PFDN5Q99471 154 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 LRRC40Q9H9A6 602 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 CD320Q9NPF0 282 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 EQTNQ9NQ60 294 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 XPNPEP1Q9NQW7 623 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 DUS2Q9NX74 493 aaKnown RBP5.15□□□□□ -1.59
HERC4-205ENST00000412272 TREM2Q9NZC2 230 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PIM2Q9P1W9 311 aa5.15□□□□□ -1.59
HERC4-205ENST00000412272 PLIN4Q96Q06 1357 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CCDC182A6NF36 153 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 E7ESA3 106 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 INPPL1O15357 1258 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SEC14L5O43304 696 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ARHGEF9O43307 516 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MRPS14O60783 128 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 OR2B3O76000 313 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ENDOD1O94919 500 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TDP2O95551 362 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 DIRAS3O95661 229 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 GALTP07902 379 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 HOXC4P09017 264 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 GSTP1P09211 210 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 OR4E1P0C645 316 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ZNF806P0C7X5 589 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 HOXA11P31270 313 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 CLCNKAP51800 687 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SOX8P57073 446 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 BFSP2Q13515 415 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PDK2Q15119 407 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 HSD17B12Q53GQ0 312 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ELP2Q6IA86 826 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PSRC1Q6PGN9 363 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 SV2BQ7L1I2 683 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SLCO6A1Q86UG4 719 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ZNF384Q8TF68 577 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TMEM41AQ96HV5 264 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KCNC2Q96PR1 638 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SPATA9Q9BWV2 254 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MIR1-1HGQ9H1L0 117 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NIPAL2Q9H841 368 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 INTS10Q9NVR2 710 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 GPR55Q9Y2T6 319 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 GRIP1Q9Y3R0 1128 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PCDHA1Q9Y5I3 950 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ADGRA2Q96PE1 1338 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MYMKA6NI61 221 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TO15178 435 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KERAO60938 352 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ABCB7O75027 752 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PMPCBO75439 489 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms