RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 TDRKHQ9Y2W6 561 aaKnown RBP23.2■■□□□ 1.3
UBE2E3-202ENST00000410062 ESPNB1AK53 854 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 RHOXF2BP0C7M4 288 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 HGFP14210 728 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 PPP1CAP62136 330 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 GBX1Q14549 363 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 RTP5Q14D33 572 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 ACSBG2Q5FVE4 666 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 IRGCQ6NXR0 463 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 GALNT7Q86SF2 657 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 TBC1D21Q8IYX1 336 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 WDR36Q8NI36 951 aaKnown RBP23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 RHOXF2Q9BQY4 288 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 XKR8Q9H6D3 395 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 POLR1BQ9H9Y6 1135 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 LRRC4CQ9HCJ2 640 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 NFS1Q9Y697 457 aa23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 MN1Q10571 1320 aaPredicted RBP23.19■■□□□ 1.3
UBE2E3-202ENST00000410062 TCRBV9S1A1TA0A576 114 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 OR6C74A6NCV1 312 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 TRA2AQ13595 282 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CUL1Q13616 776 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 KLHL35Q6PF15 583 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 SRMSQ9H3Y6 488 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 HRASLS2Q9NWW9 162 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 MTRF1LQ9UGC7 380 aaKnown RBP23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 PLAGL1Q9UM63 463 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 LOXL2Q9Y4K0 774 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 ACACBO00763 2458 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 IGF2RP11717 2491 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 OR5K3A6NET4 321 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 C9P02748 559 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 ECHS1P30084 290 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 LSSP48449 732 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 TIAL1Q01085 375 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 FAM92BQ6ZTR7 304 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 STRA8Q7Z7C7 330 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 OOSP2Q86WS3 158 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 FBXO39Q8N4B4 442 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CD200R1Q8TD46 325 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 PRR11Q96HE9 360 aaPredicted RBP23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CNTNAP3BQ96NU0 1288 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CMKLR1Q99788 373 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CNTNAP3Q9BZ76 1288 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 FAM129AQ9BZQ8 928 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 TFB2MQ9H5Q4 396 aaKnown RBP23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 CIDEBQ9UHD4 219 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 POLG2Q9UHN1 485 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 DHRS7Q9Y394 339 aa23.18■■□□□ 1.3
UBE2E3-202ENST00000410062 TPRP12270 2363 aaKnown RBP23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 CXorf49A8MYA2 514 aaPredicted RBP23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 PLD2O14939 933 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 KIF1CO43896 1103 aaKnown RBP23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 BRINP1O60477 761 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 VPS26AO75436 327 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 GSTA2P09210 222 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 TPBGLP0DKB5 382 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 CDKN2DP55273 166 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 EIF3IQ13347 325 aaKnown RBP23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 KLHL38Q2WGJ6 581 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 UNC5DQ6UXZ4 953 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 GPATCH11Q8N954 259 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 INPP5DQ92835 1189 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 CCDC86Q9H6F5 360 aaKnown RBP23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 ICKQ9UPZ9 632 aa23.17■■□□□ 1.3
UBE2E3-202ENST00000410062 HGSO14964 777 aaPredicted RBP23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 POLR2CP19387 275 aaPredicted RBP23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 ITIH1P19827 911 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 ATP5DP30049 168 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 TTLL9Q3SXZ7 439 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 ARHGAP22Q7Z5H3 698 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 SLC26A11Q86WA9 606 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 AMIGO1Q86WK6 493 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 ZDHHC12Q96GR4 267 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 FMO2Q99518 471 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 RAB33BQ9H082 229 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 EPHA6Q9UF33 1036 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 CELSR3Q9NYQ7 3312 aa23.16■■□□□ 1.3
UBE2E3-202ENST00000410062 BTN3A3O00478 584 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 RASSF9O75901 435 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 PGGT1BP53609 377 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 HECTD2Q5U5R9 776 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 CYS1Q717R9 158 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 ZC3HC1Q86WB0 502 aaKnown RBP23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 CPNE9Q8IYJ1 553 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 CDKL2Q92772 493 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 NSMCE4AQ9NXX6 385 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 TAS2R13Q9NYV9 303 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 AKAP7Q9P0M2 348 aaPredicted RBP23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 KLHL42Q9P2K6 505 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 PISDQ9UG56 409 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 TRMT6Q9UJA5 497 aaKnown RBP23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 PCDHGA8Q9Y5G5 932 aa23.15■■□□□ 1.3
UBE2E3-202ENST00000410062 FAM159BA6NKW6 160 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 BTN3A1O00481 513 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 TNFSF15O95150 251 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 C1QAP02745 245 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 CAPNS1P04632 268 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 RPN2P04844 631 aa23.14■■□□□ 1.3
UBE2E3-202ENST00000410062 JMJD7P0C870 316 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms