RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 OPTCQ9UBM4 332 aa16.36■□□□□ 0.21
LIMS2-208ENST00000410011 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-208ENST00000410011 MAN2B2Q9Y2E5 1009 aa16.36■□□□□ 0.21
LIMS2-208ENST00000410011 K7EPI3 171 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 M0QX08 132 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 COCHO43405 550 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-208ENST00000410011 CORO1AP31146 461 aaKnown RBP16.35■□□□□ 0.21
LIMS2-208ENST00000410011 SGSHP51688 502 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 FCGRTP55899 365 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 GSTM4Q03013 218 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 PTGR1Q14914 329 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 AAK1Q2M2I8 961 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 FAM9CQ8IZT9 166 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 FBXO30Q8TB52 745 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 MUL1Q969V5 352 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 HBEGFQ99075 208 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 SMURF2Q9HAU4 748 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 INVSQ9Y283 1065 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 ANKRD12Q6UB98 2062 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 LOC100130705A0A1B0GUX0 176 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 ZBTB11O95625 1053 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-208ENST00000410011 HTR1AP08908 422 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 PIK3CGP48736 1102 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 CD97P48960 835 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 TUFMP49411 452 aaKnown RBP16.35■□□□□ 0.21
LIMS2-208ENST00000410011 GZMMP51124 257 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 KCNC4Q03721 635 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 KCNAB2Q13303 367 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 CRHR2Q13324 411 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 PON2Q15165 354 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
LIMS2-208ENST00000410011 RTP2Q5QGT7 225 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 GPRC6AQ5T6X5 926 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 ZNF691Q5VV52 312 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 SERPINA9Q86WD7 417 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 PIH1D2Q8WWB5 315 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 CASD1Q96PB1 797 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 CSF3RQ99062 836 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 KCNH6Q9H252 994 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 LRTM1Q9HBL6 345 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 SH3GLB1Q9Y371 365 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 ANGPTL3Q9Y5C1 460 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 PCDHB9Q9Y5E1 797 aa16.35■□□□□ 0.21
LIMS2-208ENST00000410011 GAPDHSO14556 408 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-208ENST00000410011 GNGT2O14610 69 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 ZSCAN9O15535 394 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-208ENST00000410011 CREG1O75629 220 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 RECQL5O94762 991 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-208ENST00000410011 PRKD3O94806 890 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 DCTP40126 519 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 FLT3LGP49771 235 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 AP1S1P61966 158 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 PHEXP78562 749 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 CD47Q08722 323 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 TRIM32Q13049 653 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 SPANXN4Q5MJ08 99 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 MACC1Q6ZN28 852 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 ANKRD13BQ86YJ7 626 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 LIX1Q8N485 282 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 BPIFB6Q8NFQ5 453 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 NUDT8Q8WV74 236 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 FAM162AQ96A26 154 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 RAD21L1Q9H4I0 556 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 C1orf109Q9NX04 203 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 KLHL42Q9P2K6 505 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 SULT1C4O75897 302 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 PGLSO95336 258 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 PIGAP37287 484 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 RAD23AP54725 363 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 TWF1Q12792 350 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 PTPRRQ15256 657 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 ARMC12Q5T9G4 340 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 LAIR2Q6ISS4 152 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 C16orf87Q6PH81 154 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 OR52E6Q96RD3 313 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 TTPALQ9BTX7 342 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
LIMS2-208ENST00000410011 DNMT3BQ9UBC3 853 aaKnown RBP16.34■□□□□ 0.21
LIMS2-208ENST00000410011 ZNF490Q9ULM2 529 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-208ENST00000410011 A0A096LPI6 279 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 NPIPB8E9PQR5 432 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 MANBAO00462 879 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 LATS1O95835 1130 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 ITGAMP11215 1152 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 IL7RP16871 459 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 PCMT1P22061 227 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 MAGEA2P43356 314 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 SLC11A1P49279 550 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 CLDN8P56748 225 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 NFATC2Q13469 925 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 MEP1AQ16819 746 aa16.33■□□□□ 0.2
LIMS2-208ENST00000410011 CTU2Q2VPK5 515 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms