RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OTUD3Q5T2D3 398 aaPredicted RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 MFSD14CQ5VZR4 134 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 PRSS57Q6UWY2 283 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 PLPPR4Q7Z2D5 763 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 TLK2Q86UE8 772 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 FJX1Q86VR8 437 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 GPBP1Q86WP2 473 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 TRIML1Q8N9V2 468 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SCCPDHQ8NBX0 429 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 RTP4Q96DX8 246 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SAAL1Q96ER3 474 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 KLHL15Q96M94 604 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SPATA33Q96N06 139 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 DUX5Q96PT3 197 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 GSDMAQ96QA5 445 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 FIZ1Q96SL8 496 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 ANP32EQ9BTT0 268 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 UPF3AQ9H1J1 476 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 HOOK1Q9UJC3 728 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 KIAA0100Q14667 2235 aaKnown RBP4.3□□□□□ -1.72
CLK1-203ENST00000409769 HTTP42858 3142 aa4.3□□□□□ -1.72
CLK1-203ENST00000409769 SYNRGQ9UMZ2 1314 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 A0A087WYN8 130 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 IGKV6-21A0A0C4DH24 114 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 CCDC189A1A4V9 331 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 FSD2A1L4K1 749 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 RSPH10B2B2RC85 870 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HAS3O00219 553 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 GRID2O43424 1007 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 KRT36O76013 467 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 TMEM63AO94886 807 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 SMC2O95347 1197 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 RSPH10BP0C881 870 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 CCDC192P0DO97 292 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HSPA8P11142 646 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 EDN2P20800 178 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HOXC8P31273 242 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HNRNPH1P31943 449 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 GRIK3Q13003 919 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 COASYQ13057 564 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 TBX2Q13207 712 aaPredicted RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 STX1AQ16623 288 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 GSTA3Q16772 222 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 DPCR1Q3MIW9 517 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 XKR9Q5GH70 373 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 FAM69AQ5T7M9 428 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ZNF658Q5TYW1 1059 aaPredicted RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 C9orf57Q5W0N0 161 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 PLA2G4FQ68DD2 849 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 TYW3Q6IPR3 259 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 SASS6Q6UVJ0 657 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 C11orf57Q6ZUT1 292 aaPredicted RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 C16orf82Q7Z2V1 217 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HEATR4Q86WZ0 1026 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 DHX40Q8IX18 779 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 DAW1Q8N136 415 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ZNF114Q8NC26 417 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 KIAA0895Q8NCT3 520 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 KLHDC9Q8NEP7 349 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 OR6J1Q8NGC5 347 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 RAET1EQ8TD07 263 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ATP8B4Q8TF62 1192 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 RFFLQ8WZ73 363 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 SMARCE1Q969G3 411 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 TIPINQ9BVW5 301 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 HEMGNQ9BXL5 484 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 DHX33Q9H6R0 707 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 MAGEE1Q9HCI5 957 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 XPNPEP1Q9NQW7 623 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ANO10Q9NW15 660 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 TAS2R10Q9NYW0 307 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ERAP1Q9NZ08 941 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ZNF69Q9UC07 566 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 ODF2LQ9ULJ1 636 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 NAALADL1Q9UQQ1 740 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 LSM4Q9Y4Z0 139 aaKnown RBP4.29□□□□□ -1.72
CLK1-203ENST00000409769 TRIM17Q9Y577 477 aa4.29□□□□□ -1.72
CLK1-203ENST00000409769 COL1A2P08123 1366 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ATXN2Q99700 1313 aaKnown RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 CENPFP49454 3210 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 BRCA2P51587 3418 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ARHGEF35A5YM69 484 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 SRRM3A6NNA2 597 aaPredicted RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 USO1O60763 962 aaKnown RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 C22orf31O95567 290 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 CAVIN2O95810 425 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 AGR2O95994 175 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ZNF286BP0CG31 522 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 GAP43P17677 238 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ITGB8P26012 769 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 CDAP32320 146 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ARL2P36404 184 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms