RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 C17orf113A0A1B0GUU1 675 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 SLC16A5O15375 505 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 HDAC3O15379 428 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 KATNA1O75449 491 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 PSIP1O75475 530 aaKnown RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 APBB3O95704 486 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 CATP04040 527 aaKnown RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 ENO2P09104 434 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 EPHA3P29320 983 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 AKT2P31751 481 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 GTF2H2Q13888 395 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.466e-7■■■■■ 44.5
CHMP3-204ENST00000409727 TPRG1LQ5T0D9 272 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 GTF2H2CQ6P1K8 395 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 GALNT13Q8IUC8 556 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 GJD3Q8N144 294 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 OR52B6Q8NGF0 335 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 AGAP11Q8TF27 550 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 ASB12Q8WXK4 309 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 CCT6BQ92526 530 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 ATP6V1E2Q96A05 226 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 ATG10Q9H0Y0 220 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 FGF22Q9HCT0 170 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 DNAJC28Q9NX36 388 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 WSB2Q9NYS7 404 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 OPTCQ9UBM4 332 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 ZFP69BQ9UJL9 534 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 SLC17A4Q9Y2C5 497 aa12.16□□□□□ -0.46
CHMP3-204ENST00000409727 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-204ENST00000409727 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 GIPC1O14908 333 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 UBOX5O94941 541 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 SNUPNO95149 360 aaKnown RBP12.15□□□□□ -0.46
CHMP3-204ENST00000409727 IGLV3-19P01714 112 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 ALOX15P16050 662 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-204ENST00000409727 OXTRP30559 389 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-204ENST00000409727 SPRED3Q2MJR0 410 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 NXNQ6DKJ4 435 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 GCNT7Q6ZNI0 430 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 SYVN1Q86TM6 617 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 SPEM1Q8N4L4 309 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 DENND6BQ8NEG7 585 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 OR56A4Q8NGH8 313 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 PDXPQ96GD0 296 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 ASB2Q96Q27 587 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 OR52B2Q96RD2 323 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 C1QTNF3Q9BXJ4 246 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 NMUR2Q9GZQ4 415 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 CHRDQ9H2X0 955 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 CARS2Q9HA77 564 aaKnown RBP12.15□□□□□ -0.46
CHMP3-204ENST00000409727 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 TIMM22Q9Y584 194 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 PTGDR2Q9Y5Y4 395 aa12.15□□□□□ -0.46
CHMP3-204ENST00000409727 PRSS38A1L453 326 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 GPR89AB7ZAQ6 455 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 E9PBE3 544 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 SLCO1B7G3V0H7 640 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 KLHL41O60662 606 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 NDUFS2O75306 463 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ZNF217O75362 1048 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 STK16O75716 305 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 WDR47O94967 919 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 C1orf105O95561 183 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 MLYCDO95822 493 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 GPR89BP0CG08 455 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ITPKAP23677 461 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 HTR1BP28222 390 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 THOP1P52888 689 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 BTKQ06187 659 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ZXDCQ2QGD7 858 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 Q6ZSR6 202 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 GPRIN3Q6ZVF9 776 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 OXR1Q8N573 874 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 SNX31Q8N9S9 440 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PPFIBP2Q8ND30 876 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 TSACCQ96A04 125 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 MED8Q96G25 268 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 PKP4Q99569 1192 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 OR52A5Q9H2C5 316 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 DPEP2Q9H4A9 486 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 CAAP1Q9H8G2 361 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 VTI1BQ9UEU0 232 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
CHMP3-204ENST00000409727 ASF1AQ9Y294 204 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 K7EPI3 171 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 FCHO1O14526 889 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 OR7A17O14581 309 aa12.14□□□□□ -0.47
CHMP3-204ENST00000409727 AZIN1O14977 448 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms