RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ZNF518BQ9C0D4 1074 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 SLC7A5P2Q9GIP4 190 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 TINAGL1Q9GZM7 467 aaPredicted RBP5.4□□□□□ -1.55
CLK1-202ENST00000409403 SIK2Q9H0K1 926 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 GLT8D2Q9H1C3 349 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 SNX25Q9H3E2 840 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 SMURF2Q9HAU4 748 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 NEK6Q9HC98 313 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 SYBUQ9NX95 663 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 TAS2R14Q9NYV8 317 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 GJD2Q9UKL4 321 aa5.4□□□□□ -1.55
CLK1-202ENST00000409403 ASTN1O14525 1302 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 DENND3A2RUS2 1198 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 OTOL1A6NHN0 477 aaPredicted RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZSCAN5BA6NJL1 495 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FAM25EA8MYX2 175 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 KIAA0355O15063 1070 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FOXS1O43638 330 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 LIASO43766 372 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CPNE6O95741 557 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 UGT2B4P06133 528 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 RALAP11233 206 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 PCNAP12004 261 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 HK1P19367 917 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FGFR2P21802 821 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CXCR2P25025 360 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 RRM2P31350 389 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 SLC16A2P36021 539 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CTSWP56202 376 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 PEX3P56589 373 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 GPX6P59796 221 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 RPS16P62249 146 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 POU6F2P78424 691 aaPredicted RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 IFITM2Q01629 132 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 OTUD4Q01804 1114 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 BST2Q10589 180 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 ILF2Q12905 390 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 TRAP1Q12931 704 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 TFDP1Q14186 410 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CCL14Q16627 93 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 C5orf22Q49AR2 442 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CCDC58Q4VC31 144 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 SBK1Q52WX2 424 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FGD3Q5JSP0 725 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZFYVE27Q5T4F4 411 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FAXCQ5TGI0 409 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 LIN9Q5TKA1 542 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 LMBRD2Q68DH5 695 aaPredicted RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 ACAD10Q6JQN1 1059 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 UGT3A1Q6NUS8 523 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 GJB7Q6PEY0 223 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 SYCE2Q6PIF2 218 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 MED25Q71SY5 747 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 HDDC2Q7Z4H3 204 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 USP37Q86T82 979 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CAMK1DQ8IU85 385 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 SIAH1Q8IUQ4 282 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 RCOR2Q8IZ40 523 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZNF786Q8N393 782 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 RNF152Q8N8N0 203 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ANKFN1Q8N957 763 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 FAM47BQ8NA70 645 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 DUS3LQ96G46 650 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 CNDP1Q96KN2 507 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CEP295NLQ96MC4 621 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 KLHL32Q96NJ5 620 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 PKP2Q99959 881 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 KIFC3Q9BVG8 833 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 TRIM15Q9C019 465 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 GPR88Q9GZN0 384 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CLPBQ9H078 707 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 XYLT2Q9H1B5 865 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 UPF3AQ9H1J1 476 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 TP63Q9H3D4 680 aaPredicted RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZHX3Q9H4I2 956 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 POLR1BQ9H9Y6 1135 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 MRPL47Q9HD33 250 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 TRMT13Q9NUP7 481 aaKnown RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 RAB20Q9NX57 234 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ZNF229Q9UJW7 825 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 ANAPC7Q9UJX3 599 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 POU2F3Q9UKI9 436 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 NUP50Q9UKX7 468 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CDC14AQ9UNH5 594 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CAB39Q9Y376 341 aaPredicted RBP5.39□□□□□ -1.55
CLK1-202ENST00000409403 PLEKHM1Q9Y4G2 1056 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 CDY1Q9Y6F8 540 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 PLIN4Q96Q06 1357 aa5.39□□□□□ -1.55
CLK1-202ENST00000409403 COL11A1P12107 1806 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 SIP14410 1827 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 RGSL1A5PLK6 1076 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 C16orf96A6NNT2 1141 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 H3BQ06 376 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 TRIM38O00635 465 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms