RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SIRPB2Q5JXA9 342 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 FCRL6Q6DN72 434 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 ZNF655Q8N720 491 aaPredicted RBP16.1■□□□□ 0.17
CHMP3-203ENST00000409225 C19orf47Q8N9M1 422 aaKnown RBP16.1■□□□□ 0.17
CHMP3-203ENST00000409225 OR52E1Q8NGJ3 308 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 ZNF398Q8TD17 642 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 RAPGEF5Q92565 580 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 MAGEB10Q96LZ2 347 aaPredicted RBP16.1■□□□□ 0.17
CHMP3-203ENST00000409225 CCM2Q9BSQ5 444 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 CHST11Q9NPF2 352 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 SMOXQ9NWM0 555 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 IRAK4Q9NWZ3 460 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 SUCOQ9UBS9 1254 aaKnown RBP16.1■□□□□ 0.17
CHMP3-203ENST00000409225 CDC23Q9UJX2 597 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 PKP3Q9Y446 797 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 NF1P21359 2839 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 DOCK10Q96BY6 2186 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 NUP210LQ5VU65 1888 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 CNTRLQ7Z7A1 2325 aa16.1■□□□□ 0.17
CHMP3-203ENST00000409225 KLHL33A6NCF5 533 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 H3BMH7 237 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 ZSCAN9O15535 394 aaPredicted RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 PRAMEF1O95521 474 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 KDELR1P24390 212 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 WNT3AP56704 352 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 PDK1Q15118 436 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 PRKD1Q15139 912 aaPredicted RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 ZIC1Q15915 447 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 KRTAP21-3Q3LHN1 58 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 BCL7AQ4VC05 210 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 SPESP1Q6UW49 350 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 BNC2Q6ZN30 1099 aaPredicted RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 LINC00696Q6ZRV3 163 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 AMIGO1Q86WK6 493 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 ADGRF3Q8IZF5 1079 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 PHC3Q8NDX5 983 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 CATSPER1Q8NEC5 780 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 HM13Q8TCT9 377 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 CPLX3Q8WVH0 158 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 CCDC120Q96HB5 630 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 HGH1Q9BTY7 390 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 TRIM8Q9BZR9 551 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 TFB2MQ9H5Q4 396 aaKnown RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
CHMP3-203ENST00000409225 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
CHMP3-203ENST00000409225 TRGV8A0A0C4DH27 118 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 LOC285095A0A1B0GVY8 99 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 SOCS6O14544 535 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 APOL1O14791 398 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
CHMP3-203ENST00000409225 SGTAO43765 313 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 PROSCO94903 275 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 MMP11P24347 488 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.16
CHMP3-203ENST00000409225 GABRA4P48169 554 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 TMPRSS15P98073 1019 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 PRKG2Q13237 762 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF630Q2M218 657 aaPredicted RBP16.08■□□□□ 0.16
CHMP3-203ENST00000409225 TEX44Q53QW1 395 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 VWA2Q5GFL6 755 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 KDELC1Q6UW63 502 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 OR1N1Q8NGS0 311 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.16
CHMP3-203ENST00000409225 LHPPQ9H008 270 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 HACD3Q9P035 362 aa16.08■□□□□ 0.16
CHMP3-203ENST00000409225 ANKRD12Q6UB98 2062 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 LRRD1A4D1F6 860 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 IFRD1O00458 451 aaPredicted RBP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 PCDH17O14917 1159 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 STX7O15400 261 aaKnown RBP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 PTPN3P26045 913 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 CD68P34810 354 aaPredicted RBP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 TDGF1P3P51864 188 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 SLC9A4Q6AI14 798 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 GFRALQ6UXV0 394 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF808Q8N4W9 903 aaPredicted RBP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 DCUN1D1Q96GG9 259 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 THOC3Q96J01 351 aaKnown RBP16.07■□□□□ 0.16
CHMP3-203ENST00000409225 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 OLFM3Q96PB7 478 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 NDC1Q9BTX1 674 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 ASB8Q9H765 288 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 SLC22A11Q9NSA0 550 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 MTORP42345 2549 aa16.07■□□□□ 0.16
CHMP3-203ENST00000409225 DCHS2Q6V1P9 2916 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 CCL21O00585 134 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 DIAPH2O60879 1101 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 UGT2B7P16662 529 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 NFKB1P19838 968 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 ALAS2P22557 587 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 STX1AQ16623 288 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 TUBB8Q3ZCM7 444 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF324BQ6AW86 544 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms