RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 CA14Q9ULX7 337 aa-2.28□□□□□ -2.77
MIR548F3-201ENST00000408509 CAPN11Q9UMQ6 739 aa-2.28□□□□□ -2.77
MIR548F3-201ENST00000408509 YIPF1Q9Y548 306 aa-2.28□□□□□ -2.77
MIR548F3-201ENST00000408509 PTPRCP08575 1304 aa-2.28□□□□□ -2.77
MIR548F3-201ENST00000408509 ZNF462Q96JM2 2506 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 BDP1A6H8Y1 2624 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 A0A096LNJ9 63 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 TMEM233B4DJY2 109 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 G3V4G9 280 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 HOXC11O43248 304 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 HRGP04196 525 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 KRT19P08727 400 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ZNF182P17025 639 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 NR2F2P24468 414 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 CCNCP24863 283 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 DDIT3P35638 169 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ERVK-16P61578 105 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ZNF177Q13360 481 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ORC2Q13416 577 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 DHX8Q14562 1220 aaKnown RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 SIX1Q15475 284 aaPredicted RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 C3orf36Q3SXR2 165 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 PIGGQ5H8A4 983 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 SBSPONQ8IVN8 264 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 WDR75Q8IWA0 830 aaKnown RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 CMIPQ8IY22 773 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 CELF2-AS1Q8N7Q2 184 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 MDS2Q8NDY4 140 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 RASSF8Q8NHQ8 419 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 HDAC7Q8WUI4 952 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 HSD17B8Q92506 261 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 RIPOR3Q96MK2 946 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 NT5C1BQ96P26 610 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 QRFPRQ96P65 431 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 TM2D3Q9BRN9 247 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 GTPBP4Q9BZE4 634 aaKnown RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 ZNF350Q9GZX5 532 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 SEMA6AQ9H2E6 1030 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 GDF3Q9NR23 364 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 TYW1Q9NV66 732 aaKnown RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 PCDHGB5Q9Y5G0 923 aa-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 MTCL1Q9Y4B5 1905 aaKnown RBP-2.29□□□□□ -2.78
MIR548F3-201ENST00000408509 OR6C76A6NM76 312 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 M0QZQ0 153 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 WDR46O15213 610 aaKnown RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 TMCC2O75069 709 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 BMP10O95393 424 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 ITGA5P08648 1049 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 GNAO1P09471 354 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 THRBP10828 461 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 HLA-FP30511 346 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 P2RY4P51582 365 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 CRISP3P54108 245 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 FLI1Q01543 452 aaPredicted RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 KLHL30Q0D2K2 578 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 ITPK1Q13572 414 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 CBFBQ13951 182 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 COBLL1Q53SF7 1204 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SLC45A4Q5BKX6 768 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 TMEM196Q5HYL7 178 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SYDE2Q5VT97 1194 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 NOTUMQ6P988 496 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 Q75L30 129 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 C11orf74Q86VG3 221 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 TMEM200AQ86VY9 491 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 ABCF1Q8NE71 845 aaKnown RBP eCLIP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 ZSWIM2Q8NEG5 633 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 OR1P1Q8NH06 330 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 CFAP61Q8NHU2 1237 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SPPL2AQ8TCT8 520 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 NSUN6Q8TEA1 469 aaKnown RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 CHCHD10Q8WYQ3 142 aaPredicted RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SYN2Q92777 582 aaPredicted RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 ZSCAN31Q96LW9 406 aaPredicted RBP-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 HAUS8Q9BT25 410 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 PITPNM3Q9BZ71 974 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 LRMDAQ9H2I8 198 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SLC32A1Q9H598 525 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 Q9N2J8 555 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 DNAJC28Q9NX36 388 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 VPS51Q9UID3 782 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 PCDHB7Q9Y5E2 793 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SLC25A15Q9Y619 301 aa-2.3□□□□□ -2.78
MIR548F3-201ENST00000408509 SDHAF1A6NFY7 115 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 G3V2L1 256 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 ATP6V0E1O15342 81 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 NUPL2O15504 423 aaKnown RBP-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 TXNL1O43396 289 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 RPLP2P05387 115 aaKnown RBP-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 TFAP2AP05549 437 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 G6PDP11413 515 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 FCGR2AP12318 317 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 ACADLP28330 430 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 SLC25A1P53007 311 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 SLC16A1P53985 500 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 PRKAA2P54646 552 aa-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 EIF5P55010 431 aaKnown RBP-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 RPS8P62241 208 aaKnown RBP-2.31□□□□□ -2.78
MIR548F3-201ENST00000408509 IRX3P78415 501 aaPredicted RBP-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms